RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 TMPRSS2O15393 492 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 NDUFB3O43676 98 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 SFTPBP07988 381 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 CHRM2P08172 466 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 CALCBP10092 127 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 CD37P11049 281 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 PSG2P11465 335 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 ARSBP15848 533 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 RPS2P15880 293 aaKnown RBP8.6□□□□□ -1.03
SKA1-204ENST00000488454 SERPINA2P20848 420 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 SERPINB10P48595 397 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 TMBIM6P55061 237 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 SNU13P55769 128 aaKnown RBP8.6□□□□□ -1.03
SKA1-204ENST00000488454 OR10A3P58181 314 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 FGF12P61328 243 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 VBP1P61758 197 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 SCN1BQ07699 218 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 SPIN3Q5JUX0 258 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 HES5Q5TA89 166 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 ELP2Q6IA86 826 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 CRIP3Q6Q6R5 217 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 SPNS3Q6ZMD2 512 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 CROCCP3Q8IVE0 287 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 OSR2Q8N2R0 312 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 OR10K1Q8NGX5 313 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 RAB2BQ8WUD1 216 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 MRPS24Q96EL2 167 aaKnown RBP8.6□□□□□ -1.03
SKA1-204ENST00000488454 NEIL1Q96FI4 390 aaPredicted RBP8.6□□□□□ -1.03
SKA1-204ENST00000488454 CCL13Q99616 98 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 CST11Q9H112 138 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 DNTTIP1Q9H147 329 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 PATZ1Q9HBE1 687 aaKnown RBP8.6□□□□□ -1.03
SKA1-204ENST00000488454 IL36GQ9NZH8 169 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 STEAP1Q9UHE8 339 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 PDZD2O15018 2839 aa8.6□□□□□ -1.03
SKA1-204ENST00000488454 SHISA3A0PJX4 238 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 SMIM30A4D0T7 59 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 H3BUI4 141 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 DEGS1O15121 323 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 CRTAPO75718 401 aaPredicted RBP8.59□□□□□ -1.03
SKA1-204ENST00000488454 GABARAPO95166 117 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 BPNT1O95861 308 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 IL1AP01583 271 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 IGHV2-5P01817 119 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 WNT2P09544 360 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 ZNF44P15621 663 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 DUSP1P28562 367 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 LMO4P61968 165 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 NCS1P62166 190 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 GNB2P62879 340 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 IL13RA1P78552 427 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 ZNF146Q15072 292 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 P2RY14Q15391 338 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 DGUOKQ16854 277 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 C2orf76Q3KRA6 126 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 ESCO2Q56NI9 601 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 LRRC10Q5BKY1 277 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 ATPAF1Q5TC12 328 aaPredicted RBP8.59□□□□□ -1.03
SKA1-204ENST00000488454 STUMQ69YW2 141 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 LYPD2Q6UXB3 125 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 USP43Q70EL4 1123 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 LYPD6Q86Y78 171 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 ZNF561Q8N587 486 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 MAPK1IP1LQ8NDC0 245 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 ANGPTL6Q8NI99 470 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 KCNG3Q8TAE7 436 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 PPP1R35Q8TAP8 253 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 FAM3DQ96BQ1 224 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 GFI1Q99684 422 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 BCL7BQ9BQE9 202 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 NAA50Q9GZZ1 169 aaKnown RBP8.59□□□□□ -1.03
SKA1-204ENST00000488454 SEBOXQ9HB31 216 aaPredicted RBP8.59□□□□□ -1.03
SKA1-204ENST00000488454 KAAG1Q9UBP8 84 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 CLN8Q9UBY8 286 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 DAPK2Q9UIK4 370 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 ST3GAL6Q9Y274 331 aa8.59□□□□□ -1.03
SKA1-204ENST00000488454 CCDC168Q8NDH2 2452 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 IGKV1D-17A0A075B6S4 117 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 LOC100996750A0A140TA64 210 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 AIPO00170 330 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 TNFRSF13BO14836 293 aaPredicted RBP8.58□□□□□ -1.04
SKA1-204ENST00000488454 TMEM127O75204 238 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 FOXH1O75593 365 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 MPIG6BO95866 241 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 HAND1O96004 215 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 CLEC2LP0C7M8 214 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 CD99P14209 185 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 RPS19P39019 145 aaKnown RBP8.58□□□□□ -1.04
SKA1-204ENST00000488454 PITPNBP48739 271 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 GZMKP49863 264 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 NPY4RP50391 375 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 CAV3P56539 151 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 CLDN12P56749 244 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 IKZF1Q13422 519 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 IL13RA2Q14627 380 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 FAM189A2Q15884 450 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 CTF1Q16619 201 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 IDNKQ5T6J7 187 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 CD276Q5ZPR3 534 aa8.58□□□□□ -1.04
SKA1-204ENST00000488454 CYB5R2Q6BCY4 276 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms