RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 CAPZA1P52907 286 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 IL13RA1P78552 427 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 PIGYQ3MUY2 71 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 DCAF12L2Q5VW00 463 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 SLC36A1Q7Z2H8 476 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 OR4M1Q8NGD0 313 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 RAB40AQ8WXH6 277 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 H1FXQ92522 213 aaKnown RBP14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 C1orf147Q96MC9 270 aaPredicted RBP14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 CHST6Q9GZX3 395 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 ZNF696Q9H7X3 374 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 CKLFQ9UBR5 152 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 SLC25A10Q9UBX3 287 aaPredicted RBP14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 OR5V1Q9UGF6 321 aa14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 POLR3KQ9Y2Y1 108 aaPredicted RBP14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 NSD1Q96L73 2696 aaPredicted RBP14.18□□□□□ -0.14
SHROOM1-205ENST00000488072 PSPNO60542 156 aa14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 ZNF737O75373 536 aa14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 TNFAIP8O95379 198 aa14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 CALRP27797 417 aaKnown RBP14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 ERVFRD-1P60508 538 aa14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 SCN1BQ07699 218 aa14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 SYT6Q5T7P8 510 aaPredicted RBP14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 C22orf42Q6IC83 251 aa14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 OR10K2Q6IF99 312 aa14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 Q6P435 159 aa14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 GLIPR1L1Q6UWM5 242 aa14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 ASCL4Q6XD76 172 aa14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 TPRX1Q8N7U7 411 aa14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 OR4S1Q8NGB4 309 aa14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 C7orf69Q9H7B7 122 aa14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 TCF7L1Q9HCS4 588 aa14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 C19orf12Q9NSK7 152 aa14.17□□□□□ -0.14
SHROOM1-205ENST00000488072 KIR2DS1A0A191URI9 304 aa14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 CCRL2O00421 344 aa14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 CYB5AP00167 134 aa14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 SERPINA2P20848 420 aa14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 GADD45AP24522 165 aa14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 MAPK3P27361 379 aaPredicted RBP14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 TGFBR1P36897 503 aa14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 OR10A3P58181 314 aa14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 PAX8Q06710 450 aa14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 C17orf107Q6ZR85 190 aa14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 SAXO1Q8IYX7 474 aa14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 ASCC1Q8N9N2 400 aaKnown RBP14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 ZSCAN4Q8NAM6 433 aaPredicted RBP14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 PXT1Q8NFP0 134 aa14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 DCTN5Q9BTE1 182 aa14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 SHARPINQ9H0F6 387 aa14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 BANF2Q9H503 90 aa14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 ING3Q9NXR8 418 aa14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 RPUSD1Q9UJJ7 312 aaKnown RBP14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 MRPS28Q9Y2Q9 187 aaKnown RBP14.16□□□□□ -0.14
SHROOM1-205ENST00000488072 A0A087WXM4 84 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 A0A0G2JMP0 313 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 A0A0X1KG70 313 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 CRLF1O75462 422 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 OR2H2O95918 312 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 FGF12P61328 243 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 ARF6P62330 175 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 P2RY14Q15391 338 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 RSU1Q15404 277 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 SLC22A6Q4U2R8 563 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 LRRC10Q5BKY1 277 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 KLF17Q5JT82 389 aaPredicted RBP14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 CD200R1LQ6Q8B3 271 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 RTN4RL2Q86UN3 420 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 TMEM104Q8NE00 496 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 OR4M2Q8NGB6 313 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 FCGR1BQ92637 280 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 DNTTIP1Q9H147 329 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 EXOSC4Q9NPD3 245 aaKnown RBP14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 ZFHX3Q15911 3703 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 SETD2Q9BYW2 2564 aaPredicted RBP14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 WNK2Q9Y3S1 2297 aa14.15□□□□□ -0.14
SHROOM1-205ENST00000488072 TRDV1A0A1B0GX56 115 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 TRIM64CA6NLI5 447 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 HSPB6O14558 160 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 TK1P04183 234 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 CLEC2LP0C7M8 214 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 OR3A1P47881 315 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 CAV3P56539 151 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 CLDN12P56749 244 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 SRSF2Q01130 221 aaKnown RBP14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 PLA2G7Q13093 441 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 ZNF146Q15072 292 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 AWAT2Q6E213 333 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 BRICD5Q6PL45 260 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 NR2C2APQ86WQ0 139 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 LY6G5BQ8NDX9 201 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 FAM46BQ96A09 425 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 MED30Q96HR3 178 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 CHCHD6Q9BRQ6 235 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 BEX2Q9BXY8 128 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 METTL9Q9H1A3 318 aa14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 TXNL4BQ9NX01 149 aaKnown RBP14.14□□□□□ -0.15
SHROOM1-205ENST00000488072 A0A0B4J203 849 aa14.13□□□□□ -0.15
SHROOM1-205ENST00000488072 K7N7A8 449 aa14.13□□□□□ -0.15
SHROOM1-205ENST00000488072 CHRM2P08172 466 aa14.13□□□□□ -0.15
SHROOM1-205ENST00000488072 IGHV4-38-2P0DP08 117 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms