RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 A0A087WXM4 84 aa16.22■□□□□ 0.19
SEC22A-208ENST00000487572 PPIAL4CA0A0B4J2A2 164 aa16.22■□□□□ 0.19
SEC22A-208ENST00000487572 ENSAO43768 121 aaKnown RBP16.22■□□□□ 0.19
SEC22A-208ENST00000487572 HAND1O96004 215 aa16.22■□□□□ 0.19
SEC22A-208ENST00000487572 SRMP19623 302 aa16.22■□□□□ 0.19
SEC22A-208ENST00000487572 HNF1AP20823 631 aa16.22■□□□□ 0.19
SEC22A-208ENST00000487572 GATA3P23771 443 aa16.22■□□□□ 0.19
SEC22A-208ENST00000487572 PAX2Q02962 417 aa16.22■□□□□ 0.19
SEC22A-208ENST00000487572 LRRTM1Q86UE6 522 aa16.22■□□□□ 0.19
SEC22A-208ENST00000487572 ZNF561Q8N587 486 aa16.22■□□□□ 0.19
SEC22A-208ENST00000487572 NKAIN3Q8N8D7 197 aa16.22■□□□□ 0.19
SEC22A-208ENST00000487572 ASCC1Q8N9N2 400 aaKnown RBP16.22■□□□□ 0.19
SEC22A-208ENST00000487572 PXT1Q8NFP0 134 aa16.22■□□□□ 0.19
SEC22A-208ENST00000487572 PHYHIPQ92561 330 aa16.22■□□□□ 0.19
SEC22A-208ENST00000487572 TMPRSS13Q9BYE2 586 aa16.22■□□□□ 0.19
SEC22A-208ENST00000487572 SLITRK2Q9H156 845 aa16.22■□□□□ 0.19
SEC22A-208ENST00000487572 ZNF696Q9H7X3 374 aa16.22■□□□□ 0.19
SEC22A-208ENST00000487572 J3QLI3 93 aa16.21■□□□□ 0.19
SEC22A-208ENST00000487572 CRLF1O75462 422 aa16.21■□□□□ 0.19
SEC22A-208ENST00000487572 ARL6IP5O75915 188 aa16.21■□□□□ 0.19
SEC22A-208ENST00000487572 HTR3BO95264 441 aa16.21■□□□□ 0.19
SEC22A-208ENST00000487572 ADRA2CP18825 462 aa16.21■□□□□ 0.19
SEC22A-208ENST00000487572 CALRP27797 417 aaKnown RBP16.21■□□□□ 0.19
SEC22A-208ENST00000487572 CHRFAM7AQ494W8 412 aa16.21■□□□□ 0.19
SEC22A-208ENST00000487572 SPIN3Q5JUX0 258 aa16.21■□□□□ 0.19
SEC22A-208ENST00000487572 NR1H4Q96RI1 486 aaPredicted RBP16.21■□□□□ 0.19
SEC22A-208ENST00000487572 METTL9Q9H1A3 318 aa16.21■□□□□ 0.19
SEC22A-208ENST00000487572 CNTD2Q9H8S5 307 aa16.21■□□□□ 0.19
SEC22A-208ENST00000487572 GLS2Q9UI32 602 aa16.21■□□□□ 0.19
SEC22A-208ENST00000487572 CDC42EP3Q9UKI2 254 aa16.21■□□□□ 0.19
SEC22A-208ENST00000487572 MRPS28Q9Y2Q9 187 aaKnown RBP16.21■□□□□ 0.19
SEC22A-208ENST00000487572 ARHGAP32A7KAX9 2087 aa16.21■□□□□ 0.19
SEC22A-208ENST00000487572 KIR2DS1A0A191URI9 304 aa16.2■□□□□ 0.18
SEC22A-208ENST00000487572 MEGF11A6BM72 1044 aa16.2■□□□□ 0.18
SEC22A-208ENST00000487572 SIRPB1O00241 398 aa16.2■□□□□ 0.18
SEC22A-208ENST00000487572 ECDO95905 644 aaPredicted RBP16.2■□□□□ 0.18
SEC22A-208ENST00000487572 AVPP01185 164 aa16.2■□□□□ 0.18
SEC22A-208ENST00000487572 CHRM2P08172 466 aa16.2■□□□□ 0.18
SEC22A-208ENST00000487572 SERPINA2P20848 420 aa16.2■□□□□ 0.18
SEC22A-208ENST00000487572 MTNR1BP49286 362 aa16.2■□□□□ 0.18
SEC22A-208ENST00000487572 SCN1BQ07699 218 aa16.2■□□□□ 0.18
SEC22A-208ENST00000487572 AWAT2Q6E213 333 aa16.2■□□□□ 0.18
SEC22A-208ENST00000487572 DACT3Q96B18 629 aaPredicted RBP16.2■□□□□ 0.18
SEC22A-208ENST00000487572 MRI1Q9BV20 369 aa16.2■□□□□ 0.18
SEC22A-208ENST00000487572 RHOFQ9HBH0 211 aa16.2■□□□□ 0.18
SEC22A-208ENST00000487572 VCX3AQ9NNX9 186 aa16.2■□□□□ 0.18
SEC22A-208ENST00000487572 EXOSC4Q9NPD3 245 aaKnown RBP16.2■□□□□ 0.18
SEC22A-208ENST00000487572 LPAR3Q9UBY5 353 aa16.2■□□□□ 0.18
SEC22A-208ENST00000487572 RPUSD1Q9UJJ7 312 aaKnown RBP16.2■□□□□ 0.18
SEC22A-208ENST00000487572 NSD1Q96L73 2696 aaPredicted RBP16.2■□□□□ 0.18
SEC22A-208ENST00000487572 SH2D1BO14796 132 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 GPR37O15354 613 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 CSTBP04080 98 aaKnown RBP16.19■□□□□ 0.18
SEC22A-208ENST00000487572 GABRR1P24046 479 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 SRP14P37108 136 aaKnown RBP16.19■□□□□ 0.18
SEC22A-208ENST00000487572 CAV3P56539 151 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 FGF12P61328 243 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 ZNF146Q15072 292 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 PDCD1Q15116 288 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 SLC22A6Q4U2R8 563 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 SYT6Q5T7P8 510 aaPredicted RBP16.19■□□□□ 0.18
SEC22A-208ENST00000487572 GLT8D1Q68CQ7 371 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 GLIPR1L1Q6UWM5 242 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 ASCL4Q6XD76 172 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 CDH26Q8IXH8 852 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 OR4D6Q8NGJ1 314 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 DCTN5Q9BTE1 182 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 OPN4Q9UHM6 478 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 AUP1Q9Y679 476 aa16.19■□□□□ 0.18
SEC22A-208ENST00000487572 FN1P02751 2386 aaKnown RBP16.19■□□□□ 0.18
SEC22A-208ENST00000487572 SONP18583 2426 aaKnown RBP16.18■□□□□ 0.18
SEC22A-208ENST00000487572 TRDV1A0A1B0GX56 115 aa16.18■□□□□ 0.18
SEC22A-208ENST00000487572 TMEM82A0PJX8 343 aa16.18■□□□□ 0.18
SEC22A-208ENST00000487572 TK1P04183 234 aa16.18■□□□□ 0.18
SEC22A-208ENST00000487572 BMXP51813 675 aa16.18■□□□□ 0.18
SEC22A-208ENST00000487572 PAX8Q06710 450 aa16.18■□□□□ 0.18
SEC22A-208ENST00000487572 PIGYQ3MUY2 71 aa16.18■□□□□ 0.18
SEC22A-208ENST00000487572 ELP2Q6IA86 826 aa16.18■□□□□ 0.18
SEC22A-208ENST00000487572 C22orf42Q6IC83 251 aa16.18■□□□□ 0.18
SEC22A-208ENST00000487572 CD200R1LQ6Q8B3 271 aa16.18■□□□□ 0.18
SEC22A-208ENST00000487572 C1orf229Q6ZS94 237 aaPredicted RBP16.18■□□□□ 0.18
SEC22A-208ENST00000487572 CHST6Q9GZX3 395 aa16.18■□□□□ 0.18
SEC22A-208ENST00000487572 ONECUT1Q9UBC0 465 aa16.18■□□□□ 0.18
SEC22A-208ENST00000487572 AK6Q9Y3D8 172 aaKnown RBP16.18■□□□□ 0.18
SEC22A-208ENST00000487572 A0A1W2PQ09 198 aa16.17■□□□□ 0.18
SEC22A-208ENST00000487572 K7N7A8 449 aa16.17■□□□□ 0.18
SEC22A-208ENST00000487572 ZNF737O75373 536 aa16.17■□□□□ 0.18
SEC22A-208ENST00000487572 OR2H2O95918 312 aa16.17■□□□□ 0.18
SEC22A-208ENST00000487572 PPIAL4GP0DN37 164 aa16.17■□□□□ 0.18
SEC22A-208ENST00000487572 ZNF44P15621 663 aa16.17■□□□□ 0.18
SEC22A-208ENST00000487572 C11orf91Q3C1V1 193 aa16.17■□□□□ 0.18
SEC22A-208ENST00000487572 LYPD6Q86Y78 171 aa16.17■□□□□ 0.18
SEC22A-208ENST00000487572 FAM185AQ8N0U4 392 aa16.17■□□□□ 0.18
SEC22A-208ENST00000487572 OR4M1Q8NGD0 313 aa16.17■□□□□ 0.18
SEC22A-208ENST00000487572 FOXRED1Q96CU9 486 aaPredicted RBP16.17■□□□□ 0.18
SEC22A-208ENST00000487572 UQCC2Q9BRT2 126 aa16.17■□□□□ 0.18
SEC22A-208ENST00000487572 FAM234AQ9H0X4 552 aa16.17■□□□□ 0.18
SEC22A-208ENST00000487572 IL36GQ9NZH8 169 aa16.17■□□□□ 0.18
SEC22A-208ENST00000487572 STUB1Q9UNE7 303 aa16.17■□□□□ 0.18
SEC22A-208ENST00000487572 A0A1W2PP11 408 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms