RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 CX3CR1P49238 355 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 BMXP51813 675 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 PRKXP51817 358 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 ZNF121P58317 390 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 KRTAP10-6P60371 365 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 RPL31P62899 125 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 BLCAPP62952 87 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 GNG3P63215 75 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 TSPAN31Q12999 210 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 TIGD6Q17RP2 521 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 LDLRAD2Q5SZI1 272 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 LINC01590Q5TEZ4 76 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 LCN1P1Q5VSP4 162 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 ZNF770Q6IQ21 691 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 LCN8Q6JVE9 175 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 C16orf82Q7Z2V1 217 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 MKXQ8IYA7 352 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 LYG1Q8N1E2 194 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 DYNAPQ8N1N2 210 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 ZNF561Q8N587 486 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 FAM86B1Q8N7N1 296 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 ZNRF1Q8ND25 227 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 OR5AU1Q8NGC0 362 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 RPS4Y2Q8TD47 263 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 DYDC1Q8WWB3 177 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 HPSE2Q8WWQ2 592 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 RPL3LQ92901 407 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 IFT27Q9BW83 186 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 PAPOLGQ9BWT3 736 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 NSRP1Q9H0G5 558 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 OR51I2Q9H344 312 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 FN3KQ9H479 309 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 PPP1R3EQ9H7J1 279 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 GORASP2Q9H8Y8 452 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 INPP5EQ9NRR6 644 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 C19orf12Q9NSK7 152 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 SNTG1Q9NSN8 517 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 ZMAT5Q9UDW3 170 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 SAMD4AQ9UPU9 718 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 TSSC4Q9Y5U2 329 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
R3HDM1-218ENST00000487294 IGLV5-39A0A0G2JS06 123 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 A0A0U1RQV5 110 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 FAM90A10PA6NDY2 464 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 TVP23AA6NH52 213 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 ACOD1A6NK06 481 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 OR5B21A6NL26 309 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 HMGB1P1B2RPK0 211 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 AKR7A2O43488 359 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 SYNGR1O43759 233 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 GADD45GO95257 159 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 IGLV3-1P01715 115 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 SPARCP09486 303 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 ATP6V1B1P15313 513 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 SPI1P17947 270 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 GLRA1P23415 457 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 PAX6P26367 422 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 POU1F1P28069 291 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 PYCR1P32322 319 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 VDAC2P45880 294 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 PRDX4Q13162 271 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 KRT72Q14CN4 511 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 TAF13Q15543 124 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 SMIM21Q3B7S5 101 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 CEACAM21Q3KPI0 293 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 MINOS1Q5TGZ0 78 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 ACP7Q6ZNF0 438 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 CPLX4Q7Z7G2 160 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 LHFPL4Q7Z7J7 247 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 LINC00471Q8N535 108 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 POC1AQ8NBT0 407 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 SLC37A3Q8NCC5 494 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 PROKR2Q8NFJ6 384 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 OR52N4Q8NGI2 321 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 OR5A2Q8NGI9 324 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 ZNF671Q8TAW3 534 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 GNPDA2Q8TDQ7 276 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 AQP3Q92482 292 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 MUL1Q969V5 352 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 RCN3Q96D15 328 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 RNF170Q96K19 258 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 MCRIP2Q9BUT9 160 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 ABHD6Q9BV23 337 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 MUC13Q9H3R2 512 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 VIPAS39Q9H9C1 493 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 SEBOXQ9HB31 216 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 HES4Q9HCC6 221 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 IL1RAPQ9NPH3 570 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 ABCB10Q9NRK6 738 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 CENPMQ9NSP4 180 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 DNAJB9Q9UBS3 223 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 BAIAP2Q9UQB8 552 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 LSM4Q9Y4Z0 139 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 CDH10Q9Y6N8 788 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 MINOS1-NBL1R4GNA1 71 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 U3KQK5 164 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 DSCAML1Q8TD84 2053 aa4.04□□□□□ -1.76
R3HDM1-218ENST00000487294 TMEM272A0A1B0GTI8 110 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms