RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 MED30Q96HR3 178 aa5.88□□□□□ -1.47
UBE4B-209ENST00000487244 CEP19Q96LK0 163 aa5.88□□□□□ -1.47
UBE4B-209ENST00000487244 OPALINQ96PE5 141 aa5.88□□□□□ -1.47
UBE4B-209ENST00000487244 SUCNR1Q9BXA5 334 aa5.88□□□□□ -1.47
UBE4B-209ENST00000487244 MS4A7Q9GZW8 240 aaPredicted RBP5.88□□□□□ -1.47
UBE4B-209ENST00000487244 DNTTIP1Q9H147 329 aa5.88□□□□□ -1.47
UBE4B-209ENST00000487244 CNTD2Q9H8S5 307 aa5.88□□□□□ -1.47
UBE4B-209ENST00000487244 SIRT7Q9NRC8 400 aa5.88□□□□□ -1.47
UBE4B-209ENST00000487244 MBNL3Q9NUK0 354 aaKnown RBP5.88□□□□□ -1.47
UBE4B-209ENST00000487244 PAK1IP1Q9NWT1 392 aaPredicted RBP5.88□□□□□ -1.47
UBE4B-209ENST00000487244 RASL12Q9NYN1 266 aa5.88□□□□□ -1.47
UBE4B-209ENST00000487244 PSORS1C1Q9UIG5 152 aa5.88□□□□□ -1.47
UBE4B-209ENST00000487244 CAB39Q9Y376 341 aaPredicted RBP5.88□□□□□ -1.47
UBE4B-209ENST00000487244 IGHV1-69DA0A0B4J2H0 117 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 PNMA8CA0A1B0GUJ8 204 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 A0A1W2PQ09 198 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 A0A1W2PRD5 423 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 A0A1W2PRF3 423 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 A0A1W2PRM7 423 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 TMEM82A0PJX8 343 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 RNASEK-C17orf49H0YIS7 233 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 H3BS24 57 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 ZNF737O75373 536 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 HTR3BO95264 441 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 SERPINA3P01011 423 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 KNG1P01042 644 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 IGHV1-69P01742 117 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 LIPFP07098 398 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 RNASE1P07998 156 aaKnown RBP5.87□□□□□ -1.47
UBE4B-209ENST00000487244 CCDC159P0C7I6 412 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 PIPP12273 146 aaPredicted RBP5.87□□□□□ -1.47
UBE4B-209ENST00000487244 MYL12AP19105 171 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 FPR2P25090 351 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 C21orf33P30042 268 aaPredicted RBP5.87□□□□□ -1.47
UBE4B-209ENST00000487244 RBP2P50120 134 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 CAPZA1P52907 286 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 ERVFRD-1P60508 538 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 UBA52P62987 128 aaKnown RBP5.87□□□□□ -1.47
UBE4B-209ENST00000487244 COL10A1Q03692 680 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 PDZK1IP1Q13113 114 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 ZNF273Q14593 569 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 GPR157Q5UAW9 335 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 TMPRSS11AQ6ZMR5 421 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 TCF23Q7RTU1 214 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 FAM185AQ8N0U4 392 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 PARP16Q8N5Y8 322 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 KIR3DL3Q8N743 410 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 ASCC1Q8N9N2 400 aaKnown RBP5.87□□□□□ -1.47
UBE4B-209ENST00000487244 DNAAF1Q8NEP3 725 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 BPIFB6Q8NFQ5 453 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 OR4M1Q8NGD0 313 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 OR52N1Q8NH53 320 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 EMG1Q92979 244 aaKnown RBP5.87□□□□□ -1.47
UBE4B-209ENST00000487244 SPSB1Q96BD6 273 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 TMEM80Q96HE8 168 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 COMMD4Q9H0A8 199 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 VCXQ9H320 206 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 ZCCHC4Q9H5U6 513 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 FKBP14Q9NWM8 211 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 BABAM2Q9NXR7 383 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 TAS2R4Q9NYW5 299 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 DHDHQ9UQ10 334 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 EXOSC1Q9Y3B2 195 aaKnown RBP5.87□□□□□ -1.47
UBE4B-209ENST00000487244 PCDHGB5Q9Y5G0 923 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 KPTNQ9Y664 436 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 HSPE1-MOB4S4R3N1 261 aa5.87□□□□□ -1.47
UBE4B-209ENST00000487244 FBN3Q75N90 2809 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 A0A0U1RQK1 487 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 IRGMA1A4Y4 181 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 MAGEA13PA6NCF6 341 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 EFCAB10A6NFE3 127 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 K7N7A8 449 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 SLC1A7O00341 560 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 OGG1O15527 345 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 SULT1B1O43704 296 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 PSPNO60542 156 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 HAND1O96004 215 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 MT-ND2P03891 347 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 TK1P04183 234 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 HCKP08631 526 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 RPSAP08865 295 aaKnown RBP5.86□□□□□ -1.47
UBE4B-209ENST00000487244 CCL3L1P16619 93 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 PRKACAP17612 351 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 PRKACBP22694 351 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 ATP1B3P54709 279 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 ZP1P60852 638 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 RPS11P62280 158 aaKnown RBP eCLIP5.86□□□□□ -1.47
UBE4B-209ENST00000487244 RPL31P62899 125 aaKnown RBP5.86□□□□□ -1.47
UBE4B-209ENST00000487244 MRPL28Q13084 256 aaKnown RBP5.86□□□□□ -1.47
UBE4B-209ENST00000487244 BAMBIQ13145 260 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 PDCD1Q15116 288 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 SLC9A3R2Q15599 337 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 CCDC58Q4VC31 144 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 TMEM200BQ69YZ2 307 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 DMKNQ6E0U4 476 aaPredicted RBP5.86□□□□□ -1.47
UBE4B-209ENST00000487244 HCP5Q6MZN7 132 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 ZNF529Q6P280 563 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 RPL22L1Q6P5R6 122 aaKnown RBP5.86□□□□□ -1.47
UBE4B-209ENST00000487244 C17orf107Q6ZR85 190 aa5.86□□□□□ -1.47
UBE4B-209ENST00000487244 LHFPL2Q6ZUX7 228 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms