RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 ZNF581Q9P0T4 197 aa13.85□□□□□ -0.19
THBS3-207ENST00000486260 ANKRD17O75179 2603 aaKnown RBP13.84□□□□□ -0.19
THBS3-207ENST00000486260 RFPL4AA6NLU0 287 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 OR2AT4A6NND4 320 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 RFPL4AL1F8VTS6 287 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 PPIHO43447 177 aaKnown RBP13.84□□□□□ -0.19
THBS3-207ENST00000486260 CLPXO76031 633 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 KNG1P01042 644 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 PSG2P11465 335 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 ELK1P19419 428 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 CEBPDP49716 269 aaPredicted RBP13.84□□□□□ -0.19
THBS3-207ENST00000486260 VEGFCP49767 419 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 TMEM33P57088 247 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 BTG1P62324 171 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 ZNF146Q15072 292 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 ZMYND11Q15326 602 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 AVPI1Q5T686 147 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 FIP1L1Q6UN15 594 aaKnown RBP13.84□□□□□ -0.19
THBS3-207ENST00000486260 PEG10Q86TG7 708 aaKnown RBP13.84□□□□□ -0.19
THBS3-207ENST00000486260 DTX3Q8N9I9 347 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 WIPI2Q9Y4P8 454 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 ARID1AO14497 2285 aa13.84□□□□□ -0.19
THBS3-207ENST00000486260 TRAV38-1A0A0B4J264 116 aa13.83□□□□□ -0.19
THBS3-207ENST00000486260 APOA1P02647 267 aa13.83□□□□□ -0.19
THBS3-207ENST00000486260 GYPAP02724 150 aa13.83□□□□□ -0.19
THBS3-207ENST00000486260 MUC1P15941 1255 aaPredicted RBP13.83□□□□□ -0.19
THBS3-207ENST00000486260 CPT2P23786 658 aa13.83□□□□□ -0.19
THBS3-207ENST00000486260 SCN1BQ07699 218 aa13.83□□□□□ -0.19
THBS3-207ENST00000486260 MOGAT2Q3SYC2 334 aa13.83□□□□□ -0.19
THBS3-207ENST00000486260 SPIN3Q5JUX0 258 aa13.83□□□□□ -0.19
THBS3-207ENST00000486260 CMTM3Q96MX0 182 aa13.83□□□□□ -0.19
THBS3-207ENST00000486260 ABCG5Q9H222 651 aa13.83□□□□□ -0.19
THBS3-207ENST00000486260 PDZD2O15018 2839 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 IGKV1D-17A0A075B6S4 117 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 METTL21EPA6NDL7 271 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 FAM25AB3EWG3 89 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 FAM25CB3EWG5 89 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 FAM25GB3EWG6 89 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 SOCS1O15524 211 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 OR7C1O76099 320 aaPredicted RBP13.83□□□□□ -0.2
THBS3-207ENST00000486260 HAND1O96004 215 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 IGHV2-70P01814 119 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 GABRA2P47869 451 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 PITPNBP48739 271 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 PDLIM4P50479 330 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 IKZF1Q13422 519 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 IL13RA2Q14627 380 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 STUMQ69YW2 141 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 Q6P435 159 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 FAM89BQ8N5H3 189 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 CD177Q8N6Q3 437 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 ANGPTL6Q8NI99 470 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 RAB1CQ92928 201 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 TIMD4Q96H15 378 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 TMEM165Q9HC07 324 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 MYOZ1Q9NP98 299 aaPredicted RBP13.83□□□□□ -0.2
THBS3-207ENST00000486260 PEX16Q9Y5Y5 336 aa13.83□□□□□ -0.2
THBS3-207ENST00000486260 VPS13CQ709C8 3753 aa13.82□□□□□ -0.2
THBS3-207ENST00000486260 ISPDA4D126 451 aa13.82□□□□□ -0.2
THBS3-207ENST00000486260 SH2D1BO14796 132 aa13.82□□□□□ -0.2
THBS3-207ENST00000486260 PRDX2P32119 198 aa13.82□□□□□ -0.2
THBS3-207ENST00000486260 SIGIRRQ6IA17 410 aa13.82□□□□□ -0.2
THBS3-207ENST00000486260 LRRC28Q86X40 367 aaPredicted RBP13.82□□□□□ -0.2
THBS3-207ENST00000486260 OR6Q1Q8NGQ2 317 aa13.82□□□□□ -0.2
THBS3-207ENST00000486260 RAB40AQ8WXH6 277 aa13.82□□□□□ -0.2
THBS3-207ENST00000486260 NINJ1Q92982 152 aa13.82□□□□□ -0.2
THBS3-207ENST00000486260 MBD6Q96DN6 1003 aa13.82□□□□□ -0.2
THBS3-207ENST00000486260 S100A16Q96FQ6 103 aaKnown RBP13.82□□□□□ -0.2
THBS3-207ENST00000486260 CYYR1Q96J86 154 aa13.82□□□□□ -0.2
THBS3-207ENST00000486260 TMEM246Q9BRR3 403 aa13.82□□□□□ -0.2
THBS3-207ENST00000486260 GLS2Q9UI32 602 aa13.82□□□□□ -0.2
THBS3-207ENST00000486260 MAP1AP78559 2803 aaPredicted RBP13.81□□□□□ -0.2
THBS3-207ENST00000486260 RAB27BO00194 218 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 DEGS1O15121 323 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 OR2H2O95918 312 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 ZNF44P15621 663 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 AMY2BP19961 511 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 CDK2P24941 298 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 BLVRBP30043 206 aaPredicted RBP13.81□□□□□ -0.2
THBS3-207ENST00000486260 TNFSF8P32971 234 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 S100A5P33763 92 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 GPR6P46095 362 aaPredicted RBP13.81□□□□□ -0.2
THBS3-207ENST00000486260 MADCAM1Q13477 382 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 FAM189A2Q15884 450 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 MPV17LQ2QL34 196 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 BRICD5Q6PL45 260 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 LINC00596Q86U02 117 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 RTN4RL2Q86UN3 420 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 OR56B1Q8NGI3 324 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 METRNQ9UJH8 293 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 ZNF222Q9UK12 451 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 NAV2Q8IVL1 2488 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 FAM90A10PA6NDY2 464 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 FAM90A18PA6NE21 464 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 FAM90A16PA6NEW6 464 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 FAM90A20PA6NIJ5 464 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 FAM90A8PA6NJQ4 464 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 FAM90A7PA6NKC0 464 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 FAM90A22PA8MWA6 464 aa13.81□□□□□ -0.2
THBS3-207ENST00000486260 FAM90A12PA8MX19 464 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms