RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 TCF7L1Q9HCS4 588 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 HMG20AQ9NP66 347 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 GSTK1Q9Y2Q3 226 aa9.82□□□□□ -0.84
HPS4-214ENST00000485842 SC5DO75845 299 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 CDRT1O95170 752 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 TNFAIP8O95379 198 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 HAND1O96004 215 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 AVPP01185 164 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 SFTPBP07988 381 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 SRD5A1P18405 259 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 PSMA1P25786 263 aaKnown RBP9.81□□□□□ -0.84
HPS4-214ENST00000485842 GABRA5P31644 462 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 PTGFRP43088 359 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 FABP5Q01469 135 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 COL10A1Q03692 680 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 ZNF561Q8N587 486 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 NKAIN3Q8N8D7 197 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 ZSCAN4Q8NAM6 433 aaPredicted RBP9.81□□□□□ -0.84
HPS4-214ENST00000485842 PXT1Q8NFP0 134 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 MUL1Q969V5 352 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 EXOSC4Q9NPD3 245 aaKnown RBP9.81□□□□□ -0.84
HPS4-214ENST00000485842 RPUSD1Q9UJJ7 312 aaKnown RBP9.81□□□□□ -0.84
HPS4-214ENST00000485842 ING4Q9UNL4 249 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 SF3B6Q9Y3B4 125 aaKnown RBP9.81□□□□□ -0.84
HPS4-214ENST00000485842 AUP1Q9Y679 476 aa9.81□□□□□ -0.84
HPS4-214ENST00000485842 KIR2DS1A0A191URI9 304 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 A0A1W2PQ09 198 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 SIRPB1O00241 398 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 CCRL2O00421 344 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 HTR3BO95264 441 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 ECDO95905 644 aaPredicted RBP9.8□□□□□ -0.84
HPS4-214ENST00000485842 CHRM2P08172 466 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 UCHL1P09936 223 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 PPIAL4GP0DN37 164 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 GABRR1P24046 479 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 MTNR1BP49286 362 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 GP2P55259 537 aaKnown RBP9.8□□□□□ -0.84
HPS4-214ENST00000485842 CAV3P56539 151 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 SCN1BQ07699 218 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 SPIN3Q5JUX0 258 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 TMEM91Q6ZNR0 172 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 C1orf229Q6ZS94 237 aaPredicted RBP9.8□□□□□ -0.84
HPS4-214ENST00000485842 FAM185AQ8N0U4 392 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 PHYHIPQ92561 330 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 DACT3Q96B18 629 aaPredicted RBP9.8□□□□□ -0.84
HPS4-214ENST00000485842 NR1H4Q96RI1 486 aaPredicted RBP9.8□□□□□ -0.84
HPS4-214ENST00000485842 DCTN5Q9BTE1 182 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 SLITRK2Q9H156 845 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 METTL9Q9H1A3 318 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 PPIL3Q9H2H8 161 aaKnown RBP9.8□□□□□ -0.84
HPS4-214ENST00000485842 NDUFB11Q9NX14 153 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 ONECUT1Q9UBC0 465 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 OPN4Q9UHM6 478 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 GLS2Q9UI32 602 aa9.8□□□□□ -0.84
HPS4-214ENST00000485842 MRPS28Q9Y2Q9 187 aaKnown RBP9.8□□□□□ -0.84
HPS4-214ENST00000485842 SETD2Q9BYW2 2564 aaPredicted RBP9.79□□□□□ -0.84
HPS4-214ENST00000485842 MEGF11A6BM72 1044 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 SH2D1BO14796 132 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 GPR37O15354 613 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 ARL6IP5O75915 188 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 CSTBP04080 98 aaKnown RBP9.79□□□□□ -0.84
HPS4-214ENST00000485842 TK1P04183 234 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 ZNF44P15621 663 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 HOXB4P17483 251 aaPredicted RBP9.79□□□□□ -0.84
HPS4-214ENST00000485842 SRMP19623 302 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 SERPINA2P20848 420 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 CALRP27797 417 aaKnown RBP9.79□□□□□ -0.84
HPS4-214ENST00000485842 RIPPLY3P57055 190 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 FGF12P61328 243 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 PAX8Q06710 450 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 ZNF146Q15072 292 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 PDCD1Q15116 288 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 SLC22A6Q4U2R8 563 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 AWAT2Q6E213 333 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 GLIPR1L1Q6UWM5 242 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 LRRTM1Q86UE6 522 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 TSPAN14Q8NG11 270 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 PCGF1Q9BSM1 259 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 CHST6Q9GZX3 395 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 CNTD2Q9H8S5 307 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 RHOFQ9HBH0 211 aa9.79□□□□□ -0.84
HPS4-214ENST00000485842 IGHV3OR16-10A0A075B7F0 116 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 A0A087WXM4 84 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 TRAV40A0A0B4J280 105 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 TMEM82A0PJX8 343 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 K7N7A8 449 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 ZNF737O75373 536 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 OR2H2O95918 312 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 LIPFP07098 398 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 FAM157CP0CG43 387 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 BMXP51813 675 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 EDDM3BP56851 147 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 ARF6P62330 175 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 EDDM3AQ14507 147 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 C11orf91Q3C1V1 193 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 PIGYQ3MUY2 71 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 METTL11BQ5VVY1 283 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 GLT8D1Q68CQ7 371 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 ELP2Q6IA86 826 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 ASCL4Q6XD76 172 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms