RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ZFP41Q8N8Y5 198 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 OR13C5Q8NGS8 318 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 C17orf50Q8WW18 174 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 JAM3Q9BX67 310 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 C8orf4Q9NR00 106 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 DIMT1Q9UNQ2 313 aaKnown RBP10.04□□□□□ -0.8
MSH5-216ENST00000484309 CAB39Q9Y376 341 aaPredicted RBP10.04□□□□□ -0.8
MSH5-216ENST00000484309 SIRT4Q9Y6E7 314 aaPredicted RBP10.04□□□□□ -0.8
MSH5-216ENST00000484309 IRGMA1A4Y4 181 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 ERICH4A6NGS2 130 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 SULT1B1O43704 296 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 XPNPEP2O43895 674 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 FBP1P09467 338 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 MYL12AP19105 171 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 MDKP21741 143 aaPredicted RBP10.03□□□□□ -0.8
MSH5-216ENST00000484309 GABRR1P24046 479 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 IER3P46695 156 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 BMXP51813 675 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 UBE2E1P51965 193 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 NCR3LG1Q68D85 454 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 ASPHD2Q6ICH7 369 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 LAIR2Q6ISS4 152 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 RPL22L1Q6P5R6 122 aaKnown RBP10.03□□□□□ -0.8
MSH5-216ENST00000484309 TMPRSS11AQ6ZMR5 421 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 C1orf122Q6ZSJ8 110 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 GDPD3Q7L5L3 318 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 LDLRAD3Q86YD5 345 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 Q8IYB0 196 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 C8orf59Q8N0T1 100 aaPredicted RBP10.03□□□□□ -0.8
MSH5-216ENST00000484309 OR8H2Q8N162 312 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 OR52N4Q8NGI2 321 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 OR51A2Q8NGJ7 313 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 OR5D13Q8NGL4 314 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 TBC1D15Q8TC07 691 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 SSMEM1Q8WWF3 244 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 GGHQ92820 318 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 ORAI1Q96D31 301 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 TMEM80Q96HE8 168 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 FAM234AQ9H0X4 552 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 UNKLQ9H9P5 680 aaKnown RBP10.03□□□□□ -0.8
MSH5-216ENST00000484309 TAS2R4Q9NYW5 299 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 ZNRD1Q9P1U0 126 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 GSTK1Q9Y2Q3 226 aa10.03□□□□□ -0.8
MSH5-216ENST00000484309 EXOSC1Q9Y3B2 195 aaKnown RBP10.03□□□□□ -0.8
MSH5-216ENST00000484309 PNMA8CA0A1B0GUJ8 204 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 PSPNO60542 156 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 PAHP00439 452 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 MT-ND2P03891 347 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 CRYBA1P05813 215 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 RPSAP08865 295 aaKnown RBP10.02□□□□□ -0.81
MSH5-216ENST00000484309 TMEM225BP0DP42 221 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 SCN1BQ07699 218 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 ST3GAL4Q11206 333 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 GRK1Q15835 563 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 TAF9Q16594 264 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 C17orf107Q6ZR85 190 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 AHSA2Q719I0 299 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 TCF23Q7RTU1 214 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 SATL1Q86VE3 508 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 SERPINA12Q8IW75 414 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 C11orf42Q8N5U0 333 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 PARP16Q8N5Y8 322 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 TMEM86BQ8N661 226 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 OR4S1Q8NGB4 309 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 OR5D14Q8NGL3 314 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 SNX22Q96L94 193 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 HMG20AQ9NP66 347 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 POMT1Q9Y6A1 747 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 NBEAL1Q6ZS30 2694 aa10.02□□□□□ -0.81
MSH5-216ENST00000484309 A0A1W2PPH5 198 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 GPR137BO60478 399 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 KDM4BO94953 1096 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 RAB3AP20336 220 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 OR3A1P47881 315 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 RAG2P55895 527 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 DLX6P56179 175 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 ZP1P60852 638 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 RELBQ01201 579 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 KISS1Q15726 138 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 CCDC58Q4VC31 144 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 SPIN3Q5JUX0 258 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 BPIFB6Q8NFQ5 453 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 RPS4Y2Q8TD47 263 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 HAVCR2Q8TDQ0 301 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 GPR148Q8TDV2 347 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 NRG4Q8WWG1 115 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 TMEM106AQ96A25 262 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 GPER1Q99527 375 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 FAM192AQ9GZU8 254 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 VCXQ9H320 206 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 DCLRE1BQ9H816 532 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 EXOSC4Q9NPD3 245 aaKnown RBP10.01□□□□□ -0.81
MSH5-216ENST00000484309 CHCHD3Q9NX63 227 aaKnown RBP10.01□□□□□ -0.81
MSH5-216ENST00000484309 BABAM2Q9NXR7 383 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 ING3Q9NXR8 418 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 C1RLQ9NZP8 487 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 SF3B6Q9Y3B4 125 aaKnown RBP10.01□□□□□ -0.81
MSH5-216ENST00000484309 HSPE1-MOB4S4R3N1 261 aa10.01□□□□□ -0.81
MSH5-216ENST00000484309 EFCAB10A6NFE3 127 aa10□□□□□ -0.81
MSH5-216ENST00000484309 C17orf98A8MV24 154 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms