RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 MMP24Q9Y5R2 645 aa12.81□□□□□ -0.36
COL16A1-212ENST00000482478 CLPSL1A2RUU4 121 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 H3BUX3 64 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 SIRPB1O00241 398 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 ZNF737O75373 536 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 PEX2P28328 305 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 LGALS4P56470 323 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 RCN1Q15293 331 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 MIDNQ504T8 468 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 SPIN3Q5JUX0 258 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 HCP5Q6MZN7 132 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 TRAPPC6BQ86SZ2 158 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 FAM58AQ8N1B3 248 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 OR5AK2Q8NH90 309 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 RHOXF1Q8NHV9 184 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 C17orf50Q8WW18 174 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 ZNF714Q96N38 554 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 PDCD1LG2Q9BQ51 273 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 HEXA-AS1Q9H8Q6 139 aa12.8□□□□□ -0.36
COL16A1-212ENST00000482478 EXOSC4Q9NPD3 245 aaKnown RBP12.8□□□□□ -0.36
COL16A1-212ENST00000482478 TMEM82A0PJX8 343 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 ZFPL1O95159 310 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 CLIC3O95833 236 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 MYL12AP19105 171 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 DUSP1P28562 367 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 NPBWR2P48146 333 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 LY6EQ16553 131 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 SMN1Q16637 294 aaKnown RBP12.79□□□□□ -0.36
COL16A1-212ENST00000482478 LRRC75BQ2VPJ9 315 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 KLHL22Q53GT1 634 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 PLA1AQ53H76 456 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 TPRX1Q8N7U7 411 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 BEND2Q8NDZ0 799 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 PPP1R35Q8TAP8 253 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 CNIH3Q8TBE1 160 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 HAVCR2Q8TDQ0 301 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 CPNE2Q96FN4 548 aaPredicted RBP12.79□□□□□ -0.36
COL16A1-212ENST00000482478 SNX22Q96L94 193 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 FAM192AQ9GZU8 254 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 SLITRK2Q9H156 845 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 ZCCHC4Q9H5U6 513 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 GSTK1Q9Y2Q3 226 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 RNF114Q9Y508 228 aa12.79□□□□□ -0.36
COL16A1-212ENST00000482478 hADV38S2A0JD32 116 aa12.78□□□□□ -0.36
COL16A1-212ENST00000482478 IRGMA1A4Y4 181 aa12.78□□□□□ -0.36
COL16A1-212ENST00000482478 SULT1B1O43704 296 aa12.78□□□□□ -0.36
COL16A1-212ENST00000482478 ARG1P05089 322 aa12.78□□□□□ -0.36
COL16A1-212ENST00000482478 ZNF728P0DKX0 622 aa12.78□□□□□ -0.36
COL16A1-212ENST00000482478 GABPB1Q06547 395 aaPredicted RBP12.78□□□□□ -0.36
COL16A1-212ENST00000482478 PDZK1IP1Q13113 114 aa12.78□□□□□ -0.36
COL16A1-212ENST00000482478 PRR31Q5SQ13 230 aa12.78□□□□□ -0.36
COL16A1-212ENST00000482478 ZNF691Q5VV52 312 aa12.78□□□□□ -0.36
COL16A1-212ENST00000482478 SETD9Q8NE22 299 aa12.78□□□□□ -0.36
COL16A1-212ENST00000482478 OR13D1Q8NGV5 346 aa12.78□□□□□ -0.36
COL16A1-212ENST00000482478 PPA2Q9H2U2 334 aa12.78□□□□□ -0.36
COL16A1-212ENST00000482478 E9PI62 339 aa12.77□□□□□ -0.37
COL16A1-212ENST00000482478 WBP4O75554 376 aaKnown RBP12.77□□□□□ -0.37
COL16A1-212ENST00000482478 CLPXO76031 633 aa12.77□□□□□ -0.37
COL16A1-212ENST00000482478 RPSAP08865 295 aaKnown RBP12.77□□□□□ -0.37
COL16A1-212ENST00000482478 ZNF44P15621 663 aa12.77□□□□□ -0.37
COL16A1-212ENST00000482478 PAX6P26367 422 aa12.77□□□□□ -0.37
COL16A1-212ENST00000482478 SOX2P48431 317 aa12.77□□□□□ -0.37
COL16A1-212ENST00000482478 DYNC1I2Q13409 638 aaKnown RBP12.77□□□□□ -0.37
COL16A1-212ENST00000482478 TMPRSS11AQ6ZMR5 421 aa12.77□□□□□ -0.37
COL16A1-212ENST00000482478 FOXRED1Q96CU9 486 aaPredicted RBP12.77□□□□□ -0.37
COL16A1-212ENST00000482478 GPER1Q99527 375 aa12.77□□□□□ -0.37
COL16A1-212ENST00000482478 SSX3Q99909 188 aa12.77□□□□□ -0.37
COL16A1-212ENST00000482478 C8orf4Q9NR00 106 aa12.77□□□□□ -0.37
COL16A1-212ENST00000482478 IGKV1-12A0A0C4DH73 117 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 MAGEB3O15480 346 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 PSPNO60542 156 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 KDM4BO94953 1096 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 OR2H2O95918 312 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 IGKV1D-12P01611 117 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 RBP4P02753 201 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 MT-ND2P03891 347 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 CD2P06729 351 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 LIMS3P0CW19 117 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 LIMS4P0CW20 117 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 IGHV1-8P0DP01 117 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 RAB3AP20336 220 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 TGFBR2P37173 567 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 OR3A1P47881 315 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 GTF2A1P52655 376 aaPredicted RBP12.76□□□□□ -0.37
COL16A1-212ENST00000482478 P2RX3P56373 397 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 SRSF4Q08170 494 aaKnown RBP12.76□□□□□ -0.37
COL16A1-212ENST00000482478 MED21Q13503 144 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 ZNF146Q15072 292 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 CDK5R1Q15078 307 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 Q6ZSV7 163 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 TCF23Q7RTU1 214 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 SERPINA12Q8IW75 414 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 OR4S1Q8NGB4 309 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 OR5D14Q8NGL3 314 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 OR4C13Q8NGP0 309 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 JAM3Q9BX67 310 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 ZNF696Q9H7X3 374 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 HMG20AQ9NP66 347 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 ABCB10Q9NRK6 738 aa12.76□□□□□ -0.37
COL16A1-212ENST00000482478 ING3Q9NXR8 418 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms