RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 RPL15P61313 204 aaKnown RBP9.72□□□□□ -0.85
HMGN1-213ENST00000482192 MED21Q13503 144 aa9.72□□□□□ -0.85
HMGN1-213ENST00000482192 ZNF146Q15072 292 aa9.72□□□□□ -0.85
HMGN1-213ENST00000482192 MIDNQ504T8 468 aa9.72□□□□□ -0.85
HMGN1-213ENST00000482192 RPL22L1Q6P5R6 122 aaKnown RBP9.72□□□□□ -0.85
HMGN1-213ENST00000482192 GDPD3Q7L5L3 318 aa9.72□□□□□ -0.85
HMGN1-213ENST00000482192 SAXO1Q8IYX7 474 aa9.72□□□□□ -0.85
HMGN1-213ENST00000482192 PNKDQ8N490 385 aa9.72□□□□□ -0.85
HMGN1-213ENST00000482192 DYRK2Q92630 601 aa9.72□□□□□ -0.85
HMGN1-213ENST00000482192 CPNE2Q96FN4 548 aaPredicted RBP9.72□□□□□ -0.85
HMGN1-213ENST00000482192 TMEM80Q96HE8 168 aa9.72□□□□□ -0.85
HMGN1-213ENST00000482192 VCXQ9H320 206 aa9.72□□□□□ -0.85
HMGN1-213ENST00000482192 HEXA-AS1Q9H8Q6 139 aa9.72□□□□□ -0.85
HMGN1-213ENST00000482192 RHOFQ9HBH0 211 aa9.72□□□□□ -0.85
HMGN1-213ENST00000482192 ZNRD1Q9P1U0 126 aa9.72□□□□□ -0.85
HMGN1-213ENST00000482192 GLS2Q9UI32 602 aa9.72□□□□□ -0.85
HMGN1-213ENST00000482192 EXOSC1Q9Y3B2 195 aaKnown RBP9.72□□□□□ -0.85
HMGN1-213ENST00000482192 FBN3Q75N90 2809 aa9.71□□□□□ -0.85
HMGN1-213ENST00000482192 TMEM82A0PJX8 343 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 BTBD17A6NE02 478 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 POM121CA8CG34 1229 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 KDM4BO94953 1096 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 CD2P06729 351 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 CCL3L1P16619 93 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 PRKACAP17612 351 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 CAPGP40121 348 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 EDDM3BP56851 147 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 ERVFRD-1P60508 538 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 ZNF273Q14593 569 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 CDK5R1Q15078 307 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 KISS1Q15726 138 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 OR2G6Q5TZ20 316 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 XAF1Q6GPH4 301 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 HCP5Q6MZN7 132 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 SHISA2Q6UWI4 295 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 C17orf107Q6ZR85 190 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 C8orf59Q8N0T1 100 aaPredicted RBP9.71□□□□□ -0.86
HMGN1-213ENST00000482192 C11orf42Q8N5U0 333 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 ZSCAN4Q8NAM6 433 aaPredicted RBP9.71□□□□□ -0.86
HMGN1-213ENST00000482192 OR5D18Q8NGL1 313 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 OR4F5Q8NH21 305 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 GPR148Q8TDV2 347 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 RFT1Q96AA3 541 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 SNX22Q96L94 193 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 SPACA5Q96QH8 159 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 ZNF747Q9BV97 191 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 DCLRE1BQ9H816 532 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 HMG20AQ9NP66 347 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 CHCHD3Q9NX63 227 aaKnown RBP9.71□□□□□ -0.86
HMGN1-213ENST00000482192 BABAM2Q9NXR7 383 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 IL36RNQ9UBH0 155 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 PCDHGB5Q9Y5G0 923 aa9.71□□□□□ -0.86
HMGN1-213ENST00000482192 IGKV1-12A0A0C4DH73 117 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 A0A1B0GUS0 222 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 hADV38S2A0JD32 116 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 EFCAB10A6NFE3 127 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 C17orf98A8MV24 154 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 MAGEB3O15480 346 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 GPR137BO60478 399 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 NDUFA7O95182 113 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 IGKV1D-12P01611 117 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 RBP4P02753 201 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 GNAO1P09471 354 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 RAB3AP20336 220 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 OMGP23515 440 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 GABRR1P24046 479 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 DUSP1P28562 367 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 SOX2P48431 317 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 SNU13P55769 128 aaKnown RBP9.7□□□□□ -0.86
HMGN1-213ENST00000482192 RAG2P55895 527 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 MEF2CQ06413 473 aaPredicted RBP9.7□□□□□ -0.86
HMGN1-213ENST00000482192 EDDM3AQ14507 147 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 GRK1Q15835 563 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 OR52N1Q8NH53 320 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 PPP1R35Q8TAP8 253 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 RPS4Y2Q8TD47 263 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 RGP1Q92546 391 aaPredicted RBP9.7□□□□□ -0.86
HMGN1-213ENST00000482192 TAF15Q92804 592 aaKnown RBP eCLIP9.7□□□□□ -0.86
HMGN1-213ENST00000482192 SMIM19Q96E16 107 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 VPREB3Q9UKI3 123 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 GSTK1Q9Y2Q3 226 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 MMP24Q9Y5R2 645 aa9.7□□□□□ -0.86
HMGN1-213ENST00000482192 SH2D1BO14796 132 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 MGST3O14880 152 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 OGG1O15527 345 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 PSPNO60542 156 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 ZNF728P0DKX0 622 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 TMEM225BP0DP42 221 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 CALCBP10092 127 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 MDKP21741 143 aaPredicted RBP9.69□□□□□ -0.86
HMGN1-213ENST00000482192 COX7A1P24310 79 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 DLX6P56179 175 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 ZP1P60852 638 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 ST3GAL4Q11206 333 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 TAF9Q16594 264 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 ZNF529Q6P280 563 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 CRIP3Q6Q6R5 217 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 GDPGP1Q6ZNW5 385 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 RNF144BQ7Z419 303 aa9.69□□□□□ -0.86
HMGN1-213ENST00000482192 BEND2Q8NDZ0 799 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms