RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 KITLGP21583 273 aa9.89□□□□□ -0.83
HPS4-212ENST00000481910 ACKR3P25106 362 aa9.89□□□□□ -0.83
HPS4-212ENST00000481910 LIPAP38571 399 aa9.89□□□□□ -0.83
HPS4-212ENST00000481910 ALDH3B1P43353 468 aa9.89□□□□□ -0.83
HPS4-212ENST00000481910 SRP9P49458 86 aaKnown RBP9.89□□□□□ -0.83
HPS4-212ENST00000481910 EVX1P49640 407 aa9.89□□□□□ -0.83
HPS4-212ENST00000481910 GP2P55259 537 aaKnown RBP9.89□□□□□ -0.83
HPS4-212ENST00000481910 RNASE10Q5GAN6 216 aaKnown RBP9.89□□□□□ -0.83
HPS4-212ENST00000481910 ATPAF1Q5TC12 328 aaPredicted RBP9.89□□□□□ -0.83
HPS4-212ENST00000481910 SLC16A13Q7RTY0 426 aa9.89□□□□□ -0.83
HPS4-212ENST00000481910 MS4A15Q8N5U1 240 aa9.89□□□□□ -0.83
HPS4-212ENST00000481910 SEMA6DQ8NFY4 1073 aa9.89□□□□□ -0.83
HPS4-212ENST00000481910 OR2D3Q8NGH3 330 aa9.89□□□□□ -0.83
HPS4-212ENST00000481910 OR14K1Q8NGZ2 314 aa9.89□□□□□ -0.83
HPS4-212ENST00000481910 GPR148Q8TDV2 347 aa9.89□□□□□ -0.83
HPS4-212ENST00000481910 TSEN15Q8WW01 171 aaKnown RBP9.89□□□□□ -0.83
HPS4-212ENST00000481910 FOXRED1Q96CU9 486 aaPredicted RBP9.89□□□□□ -0.83
HPS4-212ENST00000481910 PLEKHA1Q9HB21 404 aa9.89□□□□□ -0.83
HPS4-212ENST00000481910 TAAR3PQ9P1P4 343 aa9.89□□□□□ -0.83
HPS4-212ENST00000481910 PIGLQ9Y2B2 252 aa9.89□□□□□ -0.83
HPS4-212ENST00000481910 DSCAMO60469 2012 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 PLSCR5A0PG75 271 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 A6NIN4 97 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 F5H0A9 414 aaPredicted RBP9.88□□□□□ -0.83
HPS4-212ENST00000481910 DTYMKP23919 212 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 BDKRB2P30411 391 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 MAGEB1P43366 347 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 RBX1P62877 108 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 IL24Q13007 206 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 EFNB3Q15768 340 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 SSX1Q16384 188 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 CARTPTQ16568 116 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 NKPD1Q17RQ9 610 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 MST1LQ2TV78 715 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 FTMTQ8N4E7 242 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 ARRDC1Q8N5I2 433 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 CCDC54Q8NEL0 328 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 CSNK2A3Q8NEV1 391 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 OR8G5Q8NG78 346 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 OR13C5Q8NGS8 318 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 GLYATL2Q8WU03 294 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 RGP1Q92546 391 aaPredicted RBP9.88□□□□□ -0.83
HPS4-212ENST00000481910 NARS2Q96I59 477 aaKnown RBP9.88□□□□□ -0.83
HPS4-212ENST00000481910 CBLN4Q9NTU7 201 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 GPR160Q9UJ42 338 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 DHDHQ9UQ10 334 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 LAMP3Q9UQV4 416 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 V9GYS6 101 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 PTPN13Q12923 2485 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 hCG_1807616A0A1W2PRN6 198 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 ANKRD30BLA7E2S9 258 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 A8MXK9 166 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 LMX1BO60663 402 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 LILRA1O75019 489 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 SOD3P08294 240 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 DANCRP0C864 163 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 BMP4P12644 408 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 FAHP16930 419 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 TGFBR2P37173 567 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 SOX2P48431 317 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 ACTBP60709 375 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 RPS11P62280 158 aaKnown RBP eCLIP9.88□□□□□ -0.83
HPS4-212ENST00000481910 RPS25P62851 125 aaKnown RBP9.88□□□□□ -0.83
HPS4-212ENST00000481910 ACTG1P63261 375 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 TNFRSF9Q07011 255 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 Q6ZSR3 168 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 FGGYQ96C11 551 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 MSL2Q9HCI7 577 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 NDUFB11Q9NX14 153 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 RDH8Q9NYR8 311 aa9.88□□□□□ -0.83
HPS4-212ENST00000481910 RAI1Q7Z5J4 1906 aaPredicted RBP9.87□□□□□ -0.83
HPS4-212ENST00000481910 A0A087X0M5 115 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 A0A1B0GX30 115 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 BTBD17A6NE02 478 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 DHRS7CA6NNS2 312 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 M0R233 179 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 CD2P06729 351 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 CRYGCP07315 174 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 GABRA5P31644 462 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 MMP15P51511 669 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 SNRPD2P62316 118 aaKnown RBP9.87□□□□□ -0.83
HPS4-212ENST00000481910 TRAM1Q15629 374 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 HFEQ30201 348 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 Q499Y3 187 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 LHFPL2Q6ZUX7 228 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 PIGCQ92535 297 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 TMEM106AQ96A25 262 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 CLUHP3Q96NS8 147 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 OR14A2Q96R54 314 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 DYNLRB1Q9NP97 96 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 CYSLTR2Q9NS75 346 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 TMEM100Q9NV29 134 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 MRPL15Q9P015 296 aaKnown RBP9.87□□□□□ -0.83
HPS4-212ENST00000481910 SF3B6Q9Y3B4 125 aaKnown RBP9.87□□□□□ -0.83
HPS4-212ENST00000481910 RHBDD3Q9Y3P4 386 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 ARFGEF3Q5TH69 2177 aa9.87□□□□□ -0.83
HPS4-212ENST00000481910 TRBV5-5A0A0J9YX44 114 aa9.86□□□□□ -0.83
HPS4-212ENST00000481910 ZNF816-ZNF321PA0A0X1KG74 233 aa9.86□□□□□ -0.83
HPS4-212ENST00000481910 METTL21EPA6NDL7 271 aa9.86□□□□□ -0.83
HPS4-212ENST00000481910 DLEU1O43261 78 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms