RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 WFDC12Q8WWY7 111 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 CPNE2Q96FN4 548 aaPredicted RBP12.52□□□□□ -0.41
CDK9-203ENST00000480353 ZNF714Q96N38 554 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 CHST6Q9GZX3 395 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 PPA2Q9H2U2 334 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 ZCCHC4Q9H5U6 513 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 RAB18Q9NP72 206 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 EXOSC4Q9NPD3 245 aaKnown RBP12.52□□□□□ -0.41
CDK9-203ENST00000480353 RBFOX1Q9NWB1 397 aaKnown RBP12.52□□□□□ -0.41
CDK9-203ENST00000480353 ERVK13-1Q9NX77 482 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 MYRFQ9Y2G1 1151 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 GSTK1Q9Y2Q3 226 aa12.52□□□□□ -0.41
CDK9-203ENST00000480353 IRGMA1A4Y4 181 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 FUOMA2VDF0 154 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 F8VVB4 439 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 F8VWA3 439 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 ARG1P05089 322 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 ZNF728P0DKX0 622 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 CALCBP10092 127 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 GABRB1P18505 474 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 DUSP1P28562 367 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 BMXP51813 675 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 RELBQ01201 579 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 PDZK1IP1Q13113 114 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 DYNC1I2Q13409 638 aaKnown RBP12.51□□□□□ -0.41
CDK9-203ENST00000480353 MED21Q13503 144 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 LY6EQ16553 131 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 PRR31Q5SQ13 230 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 SERPINA12Q8IW75 414 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 OR51A4Q8NGJ6 313 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 OR52I1Q8NGK6 324 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 OR5D18Q8NGL1 313 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 CYGBQ8WWM9 190 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 RDH12Q96NR8 316 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 ISG20L2Q9H9L3 353 aaKnown RBP12.51□□□□□ -0.41
CDK9-203ENST00000480353 ABCB10Q9NRK6 738 aa12.51□□□□□ -0.41
CDK9-203ENST00000480353 IGKV1-9A0A0C4DH69 117 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 MEX3AA1L020 520 aaKnown RBP12.5□□□□□ -0.41
CDK9-203ENST00000480353 OR4C45A6NMZ5 311 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 E9PQ18 207 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 SIRPB1O00241 398 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 TIMM23O14925 209 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 IGHA1P01876 353 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 TMEM225BP0DP42 221 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 MYL12AP19105 171 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 NPBWR2P48146 333 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 MEF2CQ06413 473 aaPredicted RBP12.5□□□□□ -0.41
CDK9-203ENST00000480353 SCN1BQ07699 218 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 LRRC36Q1X8D7 754 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 TMPRSS11AQ6ZMR5 421 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 OR10AC1Q8NH08 325 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 LINC01006Q8NI28 216 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 SPACA5Q96QH8 159 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 GPER1Q99527 375 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 CHCHD3Q9NX63 227 aaKnown RBP12.5□□□□□ -0.41
CDK9-203ENST00000480353 DSCAML1Q8TD84 2053 aa12.5□□□□□ -0.41
CDK9-203ENST00000480353 C17orf98A8MV24 154 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 M0QZ24 198 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 MGST3O14880 152 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 ZNF737O75373 536 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 RBP4P02753 201 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 CD2P06729 351 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 ZNF44P15621 663 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 PLA1AQ53H76 456 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 TTC23Q5W5X9 447 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 LPCAT4Q643R3 524 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 HCP5Q6MZN7 132 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 TREML4Q6UXN2 200 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 Q6ZSV7 163 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 SATL1Q86VE3 508 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 SETD9Q8NE22 299 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 C17orf50Q8WW18 174 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 RNF166Q96A37 237 aaPredicted RBP12.49□□□□□ -0.41
CDK9-203ENST00000480353 FOXRED1Q96CU9 486 aaPredicted RBP12.49□□□□□ -0.41
CDK9-203ENST00000480353 PDCD1LG2Q9BQ51 273 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 TCF7L1Q9HCS4 588 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 C8orf4Q9NR00 106 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 IL36RNQ9UBH0 155 aa12.49□□□□□ -0.41
CDK9-203ENST00000480353 TMEM82A0PJX8 343 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 H3BUI4 141 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 SULT1B1O43704 296 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 ZFPL1O95159 310 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 MT-ND2P03891 347 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 IGHV1-8P0DP01 117 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 RAB3AP20336 220 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 GABRA5P31644 462 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 ZNF146Q15072 292 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 FAM189A2Q15884 450 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 TPRX1Q8N7U7 411 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 DTX3Q8N9I9 347 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 OR4C13Q8NGP0 309 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 FAM192AQ9GZU8 254 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 MEGF9Q9H1U4 602 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 GAL3ST2Q9H3Q3 398 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 RHOFQ9HBH0 211 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 HMG20AQ9NP66 347 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 TBL2Q9Y4P3 447 aaKnown RBP12.48□□□□□ -0.41
CDK9-203ENST00000480353 LINC00312Q9Y6C7 94 aa12.48□□□□□ -0.41
CDK9-203ENST00000480353 NBEAL1Q6ZS30 2694 aa12.47□□□□□ -0.41
CDK9-203ENST00000480353 TRGV10A0A0A0MS01 117 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms