RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 JCADQ9P266 1359 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 LAMA4Q16363 1823 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 ATAD5Q96QE3 1844 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 GOLGA8JA6NMD2 632 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 LSM1O15116 133 aaKnown RBP-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 CCNB2O95067 398 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 ERCC1P07992 297 aaPredicted RBP-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 GUSBP08236 651 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 GOLGA8HP0CJ92 632 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 MYL2P10916 166 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 IMPA1P29218 277 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 PSMB2P49721 201 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 MTPNP58546 118 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 LAMTOR4Q0VGL1 99 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 IL24Q13007 206 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 SSX1Q16384 188 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 FAM229BQ4G0N7 80 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 OR11G2Q8NGC1 345 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 ING5Q8WYH8 240 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 SMARCD1Q96GM5 515 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 GPR21Q99679 349 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 ARL6Q9H0F7 186 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 HYPKQ9NX55 129 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 BABAM2Q9NXR7 383 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 VAX2Q9UIW0 290 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 KANK1Q14678 1352 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 BDP1A6H8Y1 2624 aa-0.38□□□□□ -2.47
NCKAP1-204ENST00000477988 MUC12Q9UKN1 5478 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 SLC22A20A6NK97 555 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 ERI3O43414 337 aaKnown RBP-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 HUS1O60921 280 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 PLEKHA8P1O95397 391 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 GPR75O95800 540 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 PTTG1O95997 202 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 CD36P16671 472 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 NCF2P19878 526 aaPredicted RBP-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 MSR1P21757 451 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 BPIFB3P59826 476 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 HTR4Q13639 388 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 UAP1Q16222 522 aaPredicted RBP-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 ELP2Q6IA86 826 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 RWDD4Q6NW29 188 aaKnown RBP-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 SPESP1Q6UW49 350 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 WDR82Q6UXN9 313 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 C2orf91Q6ZV80 131 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 CYP4Z2PQ8N1L4 340 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 TTC29Q8NA56 475 aaPredicted RBP-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 OR7G2Q8NG99 324 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 RNF133Q8WVZ7 376 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 SMIM8Q96KF7 97 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 TMEM165Q9HC07 324 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 INSIG2Q9Y5U4 225 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 CLUHO75153 1309 aa-0.39□□□□□ -2.47
NCKAP1-204ENST00000477988 COL18A1P39060 1754 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 NUMA1Q14980 2115 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 ARFGEF3Q5TH69 2177 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 BAZ2BQ9UIF8 2168 aaKnown RBP-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 PIEZO1Q92508 2521 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 TRBV6-5A0A0K0K1A5 114 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 FAM240BA0A1B0GVZ2 78 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 IGSF23A1L1A6 192 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 SMCO3A2RU48 225 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 J3QT63 122 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 SMC2O95347 1197 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 TDP2O95551 362 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 SURF2Q15527 256 aaPredicted RBP-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 ZBTB6Q15916 424 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 SLC7A5P1Q8MH63 180 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 OR4K2Q8NGD2 314 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 OR56B2PQ8NGI1 322 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 ERMNQ8TAM6 284 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 TMBIM1Q969X1 311 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 SPACA5Q96QH8 159 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 Q9BRP9 147 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 ZNF436Q9C0F3 470 aaPredicted RBP-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 ASB7Q9H672 318 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 ANKRA2Q9H9E1 313 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 VCX3AQ9NNX9 186 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 CELSR1Q9NYQ6 3014 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 ANK2Q01484 3957 aa-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 USP42Q9H9J4 1324 aaKnown RBP-0.4□□□□□ -2.47
NCKAP1-204ENST00000477988 DISP1Q96F81 1524 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 KDM5BQ9UGL1 1544 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 OR5H14A6NHG9 310 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 SLC25A20O43772 301 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 COX7A2P2O60397 106 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 UPK1BO75841 260 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 PSKH1P11801 424 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 GTF2E2P29084 291 aaKnown RBP-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 CCR7P32248 378 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 NBL1P41271 181 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 RPL23AP62750 156 aaKnown RBP-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 LAIR2Q6ISS4 152 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 FAM9BQ8IZU0 186 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 BBS5Q8N3I7 341 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 EIF1ADQ8N9N8 165 aaKnown RBP-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 Q96M85 177 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 XPO6Q96QU8 1125 aaKnown RBP-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 ULBP1Q9BZM6 244 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 REEP1Q9H902 201 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms