RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 CCL3L1P16619 93 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 BCL3P20749 454 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 OMGP23515 440 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 POU3F4P49335 361 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 RAG2P55895 527 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 ADARB1P78563 741 aaKnown RBP17.73■□□□□ 0.43
COL9A3-211ENST00000477612 CCDC58Q4VC31 144 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 SPIN3Q5JUX0 258 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 SAXO1Q8IYX7 474 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 OR13C9Q8NGT0 318 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 OR5AK2Q8NH90 309 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 PDCD1LG2Q9BQ51 273 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 COMMD4Q9H0A8 199 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 BEX1Q9HBH7 125 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 NEK6Q9HC98 313 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 IGKV1-12A0A0C4DH73 117 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 IRGMA1A4Y4 181 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 SPRY1O43609 319 aaPredicted RBP17.72■□□□□ 0.43
COL9A3-211ENST00000477612 KDM4BO94953 1096 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 INMTO95050 263 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 CLIC3O95833 236 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 HAND1O96004 215 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 IGKV1D-12P01611 117 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 MEF2CQ06413 473 aaPredicted RBP17.72■□□□□ 0.43
COL9A3-211ENST00000477612 LRRC36Q1X8D7 754 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 GDPGP1Q6ZNW5 385 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 GDPD3Q7L5L3 318 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 RNF144BQ7Z419 303 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 OR5D14Q8NGL3 314 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 OR5R1Q8NH85 324 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 HMG20AQ9NP66 347 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 IL36RNQ9UBH0 155 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 VPREB3Q9UKI3 123 aa17.72■□□□□ 0.43
COL9A3-211ENST00000477612 KIAA2026Q5HYC2 2103 aa17.71■□□□□ 0.43
COL9A3-211ENST00000477612 CASQ2O14958 399 aaPredicted RBP17.71■□□□□ 0.43
COL9A3-211ENST00000477612 ANGPTL7O43827 346 aa17.71■□□□□ 0.43
COL9A3-211ENST00000477612 LMO1P25800 156 aa17.71■□□□□ 0.43
COL9A3-211ENST00000477612 ETV1P50549 477 aa17.71■□□□□ 0.43
COL9A3-211ENST00000477612 GTF2A1P52655 376 aaPredicted RBP17.71■□□□□ 0.43
COL9A3-211ENST00000477612 ERVFRD-1P60508 538 aa17.71■□□□□ 0.43
COL9A3-211ENST00000477612 IL18R1Q13478 541 aa17.71■□□□□ 0.43
COL9A3-211ENST00000477612 RCN1Q15293 331 aa17.71■□□□□ 0.43
COL9A3-211ENST00000477612 ZNF529Q6P280 563 aa17.71■□□□□ 0.43
COL9A3-211ENST00000477612 RPL22L1Q6P5R6 122 aaKnown RBP17.71■□□□□ 0.43
COL9A3-211ENST00000477612 DHRSXQ8N5I4 330 aa17.71■□□□□ 0.43
COL9A3-211ENST00000477612 ZSCAN4Q8NAM6 433 aaPredicted RBP17.71■□□□□ 0.43
COL9A3-211ENST00000477612 SETD9Q8NE22 299 aa17.71■□□□□ 0.43
COL9A3-211ENST00000477612 OR52N4Q8NGI2 321 aa17.71■□□□□ 0.43
COL9A3-211ENST00000477612 CNIH3Q8TBE1 160 aa17.71■□□□□ 0.43
COL9A3-211ENST00000477612 ZNF696Q9H7X3 374 aa17.71■□□□□ 0.43
COL9A3-211ENST00000477612 DIMT1Q9UNQ2 313 aaKnown RBP17.71■□□□□ 0.43
COL9A3-211ENST00000477612 HSPE1-MOB4S4R3N1 261 aa17.71■□□□□ 0.43
COL9A3-211ENST00000477612 CLPSL1A2RUU4 121 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 SULT1B1O43704 296 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 PSPNO60542 156 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 PAHP00439 452 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 OCM2P0CE71 109 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 OCMP0CE72 109 aaPredicted RBP17.7■□□□□ 0.42
COL9A3-211ENST00000477612 ZNF728P0DKX0 622 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 PRKACAP17612 351 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 PEX2P28328 305 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 ERP29P30040 261 aaKnown RBP17.7■□□□□ 0.42
COL9A3-211ENST00000477612 ZP1P60852 638 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 AANATQ16613 207 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 OLFML2AQ68BL7 652 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 TCF23Q7RTU1 214 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 RFT1Q96AA3 541 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 SPACA5Q96QH8 159 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 GLS2Q9UI32 602 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 DHDHQ9UQ10 334 aa17.7■□□□□ 0.42
COL9A3-211ENST00000477612 PKD1L1Q8TDX9 2849 aa17.69■□□□□ 0.42
COL9A3-211ENST00000477612 BTBD17A6NE02 478 aa17.69■□□□□ 0.42
COL9A3-211ENST00000477612 FAM90A8PA6NJQ4 464 aa17.69■□□□□ 0.42
COL9A3-211ENST00000477612 OGG1O15527 345 aa17.69■□□□□ 0.42
COL9A3-211ENST00000477612 PIPP12273 146 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-211ENST00000477612 EDDM3BP56851 147 aa17.69■□□□□ 0.42
COL9A3-211ENST00000477612 CDK5R1Q15078 307 aa17.69■□□□□ 0.42
COL9A3-211ENST00000477612 KISS1Q15726 138 aa17.69■□□□□ 0.42
COL9A3-211ENST00000477612 PRR31Q5SQ13 230 aa17.69■□□□□ 0.42
COL9A3-211ENST00000477612 OGFRL1Q5TC84 451 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-211ENST00000477612 XAF1Q6GPH4 301 aa17.69■□□□□ 0.42
COL9A3-211ENST00000477612 TMPRSS11AQ6ZMR5 421 aa17.69■□□□□ 0.42
COL9A3-211ENST00000477612 C17orf50Q8WW18 174 aa17.69■□□□□ 0.42
COL9A3-211ENST00000477612 CYGBQ8WWM9 190 aa17.69■□□□□ 0.42
COL9A3-211ENST00000477612 RGP1Q92546 391 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-211ENST00000477612 EXOSC1Q9Y3B2 195 aaKnown RBP17.69■□□□□ 0.42
COL9A3-211ENST00000477612 MGST3O14880 152 aa17.68■□□□□ 0.42
COL9A3-211ENST00000477612 DUSP1P28562 367 aa17.68■□□□□ 0.42
COL9A3-211ENST00000477612 GRK1Q15835 563 aa17.68■□□□□ 0.42
COL9A3-211ENST00000477612 OR2G6Q5TZ20 316 aa17.68■□□□□ 0.42
COL9A3-211ENST00000477612 ASPHD2Q6ICH7 369 aa17.68■□□□□ 0.42
COL9A3-211ENST00000477612 OR4S1Q8NGB4 309 aa17.68■□□□□ 0.42
COL9A3-211ENST00000477612 LINC01006Q8NI28 216 aa17.68■□□□□ 0.42
COL9A3-211ENST00000477612 PPP1R35Q8TAP8 253 aa17.68■□□□□ 0.42
COL9A3-211ENST00000477612 WFDC12Q8WWY7 111 aa17.68■□□□□ 0.42
COL9A3-211ENST00000477612 C16orf95Q9H693 158 aa17.68■□□□□ 0.42
COL9A3-211ENST00000477612 BABAM2Q9NXR7 383 aa17.68■□□□□ 0.42
COL9A3-211ENST00000477612 LINC00312Q9Y6C7 94 aa17.68■□□□□ 0.42
COL9A3-211ENST00000477612 hADV38S2A0JD32 116 aa17.67■□□□□ 0.42
COL9A3-211ENST00000477612 SH2D1BO14796 132 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms