RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 JAGN1Q8N5M9 183 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 FAM216BQ8N7L0 139 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 Q8NFD4 153 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 TBC1D15Q8TC07 691 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 ST8SIA4Q92187 359 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 ORAI1Q96D31 301 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 MRI1Q9BV20 369 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 FAM192AQ9GZU8 254 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 SHARPINQ9H0F6 387 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 METTL9Q9H1A3 318 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 ELL3Q9HB65 397 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-205ENST00000477508 RBFOX1Q9NWB1 397 aaKnown RBP10.9□□□□□ -0.66
TOP3A-205ENST00000477508 IL36GQ9NZH8 169 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 SLC25A10Q9UBX3 287 aaPredicted RBP10.9□□□□□ -0.66
TOP3A-205ENST00000477508 OR14J1Q9UGF5 321 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 MAB21L2Q9Y586 359 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 INSIG2Q9Y5U4 225 aa10.9□□□□□ -0.66
TOP3A-205ENST00000477508 TRBV23-1A0A0A0MS06 115 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 IGHV2-70DA0A0C4DH43 119 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 IGKV1-12A0A0C4DH73 117 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 TRDV1A0A1B0GX56 115 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 INAFM1C9JVW0 142 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 SH2D1BO14796 132 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 INMTO95050 263 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 IGKV1D-12P01611 117 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 CSTBP04080 98 aaKnown RBP10.89□□□□□ -0.67
TOP3A-205ENST00000477508 PPIAL4GP0DN37 164 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 FABP5Q01469 135 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 PAX2Q02962 417 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 IKZF1Q13422 519 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 INSL4Q14641 139 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 DGUOKQ16854 277 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 CHRFAM7AQ494W8 412 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 FAM120AOSQ5T036 256 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 FAM27D1Q5T7N8 215 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 GLT8D1Q68CQ7 371 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 BTN2A1Q7KYR7 527 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 RNF144BQ7Z419 303 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 CD177Q8N6Q3 437 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 TMEM185AQ8NFB2 350 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 OR5D13Q8NGL4 314 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 PPP1R35Q8TAP8 253 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 MRPS24Q96EL2 167 aaKnown RBP10.89□□□□□ -0.67
TOP3A-205ENST00000477508 NUDT16L1Q9BRJ7 211 aaKnown RBP10.89□□□□□ -0.67
TOP3A-205ENST00000477508 BEX2Q9BXY8 128 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 C7orf69Q9H7B7 122 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 MMP26Q9NRE1 261 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 GHRLQ9UBU3 117 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 ING4Q9UNL4 249 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 ARHGAP32A7KAX9 2087 aa10.89□□□□□ -0.67
TOP3A-205ENST00000477508 NIPBLQ6KC79 2804 aaeCLIP10.89□□□□□ -0.67
TOP3A-205ENST00000477508 K7N7A8 449 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 CRLF1O75462 422 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 HAND1O96004 215 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 SFTPBP07988 381 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 UBBP0CG47 229 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 NDUFB7P17568 137 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 CALRP27797 417 aaKnown RBP10.88□□□□□ -0.67
TOP3A-205ENST00000477508 OR3A4PP47883 348 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 CAPZA1P52907 286 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 GP2P55259 537 aaKnown RBP10.88□□□□□ -0.67
TOP3A-205ENST00000477508 PAX8Q06710 450 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 SCGB2A2Q13296 93 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 NEDD8Q15843 81 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 LRRTM1Q86UE6 522 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 BATF2Q8N1L9 274 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 CHST4Q8NCG5 386 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 ZNRF1Q8ND25 227 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 OR51T1Q8NGJ9 327 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 MUL1Q969V5 352 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 DACT3Q96B18 629 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-205ENST00000477508 SNX22Q96L94 193 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 TMPRSS13Q9BYE2 586 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 PPIL3Q9H2H8 161 aaKnown RBP10.88□□□□□ -0.67
TOP3A-205ENST00000477508 CNTD2Q9H8S5 307 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 EXOSC4Q9NPD3 245 aaKnown RBP10.88□□□□□ -0.67
TOP3A-205ENST00000477508 RPUSD1Q9UJJ7 312 aaKnown RBP10.88□□□□□ -0.67
TOP3A-205ENST00000477508 GSTK1Q9Y2Q3 226 aa10.88□□□□□ -0.67
TOP3A-205ENST00000477508 MRPS28Q9Y2Q9 187 aaKnown RBP10.88□□□□□ -0.67
TOP3A-205ENST00000477508 FN1P02751 2386 aaKnown RBP10.88□□□□□ -0.67
TOP3A-205ENST00000477508 SETD2Q9BYW2 2564 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-205ENST00000477508 NAV3Q8IVL0 2385 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 TRAV1-2A0A0B4J238 106 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 A0A1B0GW55 424 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 A0A1W2PPH5 198 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 MAGEA13PA6NCF6 341 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 TRIM64CA6NLI5 447 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 C22orf46C9J442 243 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 H3BUI4 141 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 PDCD5O14737 125 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 TK1P04183 234 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 DUX4L2P0CJ85 424 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 DUX4L3P0CJ86 424 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 DUX4L4P0CJ87 422 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 DUX4L5P0CJ88 424 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 DUX4L6P0CJ89 424 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 DUX4L7P0CJ90 424 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 CD37P11049 281 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 GTF2F2P13984 249 aa10.87□□□□□ -0.67
TOP3A-205ENST00000477508 MYL9P24844 172 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms