RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 HSPE1-MOB4S4R3N1 261 aa10.01□□□□□ -0.81
SKA3-206ENST00000475251 V9GYS6 101 aa10.01□□□□□ -0.81
SKA3-206ENST00000475251 FUOMA2VDF0 154 aa10□□□□□ -0.81
SKA3-206ENST00000475251 OOSP1A8MZH6 123 aa10□□□□□ -0.81
SKA3-206ENST00000475251 LOC110117498-PIK3R3F6TDL0 507 aa10□□□□□ -0.81
SKA3-206ENST00000475251 TOR1AO14656 332 aa10□□□□□ -0.81
SKA3-206ENST00000475251 MGST3O14880 152 aa10□□□□□ -0.81
SKA3-206ENST00000475251 HAND1O96004 215 aa10□□□□□ -0.81
SKA3-206ENST00000475251 AMY1AP04745 511 aa10□□□□□ -0.81
SKA3-206ENST00000475251 AMY2AP04746 511 aa10□□□□□ -0.81
SKA3-206ENST00000475251 GABRR1P24046 479 aa10□□□□□ -0.81
SKA3-206ENST00000475251 ERP29P30040 261 aaKnown RBP10□□□□□ -0.81
SKA3-206ENST00000475251 C8orf86Q6ZUL3 223 aa10□□□□□ -0.81
SKA3-206ENST00000475251 OR2W3Q7Z3T1 314 aa10□□□□□ -0.81
SKA3-206ENST00000475251 ANGPTL5Q86XS5 388 aa10□□□□□ -0.81
SKA3-206ENST00000475251 EGFL6Q8IUX8 553 aa10□□□□□ -0.81
SKA3-206ENST00000475251 KLHL30-AS1Q8NEE0 82 aa10□□□□□ -0.81
SKA3-206ENST00000475251 GIPC3Q8TF64 312 aa10□□□□□ -0.81
SKA3-206ENST00000475251 EMG1Q92979 244 aaKnown RBP10□□□□□ -0.81
SKA3-206ENST00000475251 P2RX4Q99571 388 aa10□□□□□ -0.81
SKA3-206ENST00000475251 FEVQ99581 238 aa10□□□□□ -0.81
SKA3-206ENST00000475251 PCDHB16Q9NRJ7 776 aa10□□□□□ -0.81
SKA3-206ENST00000475251 TRGV10A0A0A0MS01 117 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 FAM230AA0A1W2PPH8 454 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 TMEM82A0PJX8 343 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 GATBO75879 557 aaKnown RBP9.99□□□□□ -0.81
SKA3-206ENST00000475251 SASH3O75995 380 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 CYB5AP00167 134 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 IGLV1-47P01700 117 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 SLC2A5P22732 501 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 OR3A4PP47883 348 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 HCCSP53701 268 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 PRRX1P54821 245 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 P2RX3P56373 397 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 CDC42P60953 191 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 MFGE8Q08431 387 aaPredicted RBP9.99□□□□□ -0.81
SKA3-206ENST00000475251 APOFQ13790 326 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 HEPN1Q6WQI6 88 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 ELMOD2Q8IZ81 293 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 TPRX1Q8N7U7 411 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 Q8NFD4 153 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 OR14K1Q8NGZ2 314 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 TRMT10AQ8TBZ6 339 aaKnown RBP9.99□□□□□ -0.81
SKA3-206ENST00000475251 CHST6Q9GZX3 395 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 ZNF556Q9HAH1 456 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 TAS2R3Q9NYW6 316 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 MTCH1Q9NZJ7 389 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 HHLA2Q9UM44 414 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 LSM4Q9Y4Z0 139 aaKnown RBP9.99□□□□□ -0.81
SKA3-206ENST00000475251 SNX5Q9Y5X3 404 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 R4GMQ9 66 aa9.99□□□□□ -0.81
SKA3-206ENST00000475251 SH2D7A6NKC9 451 aaPredicted RBP9.98□□□□□ -0.81
SKA3-206ENST00000475251 SERPINA3P01011 423 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 MRPL3P09001 348 aaKnown RBP9.98□□□□□ -0.81
SKA3-206ENST00000475251 ATP6V1B2P21281 511 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 CDK2P24941 298 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 CD34P28906 385 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 FUT6P51993 359 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 CDK5Q00535 292 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 HLA-DRB5Q30154 266 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 LINC01559Q495D7 138 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 SPIN3Q5JUX0 258 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 TPTE2P1Q5T6R2 138 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 C9orf66Q5T8R8 295 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 Q6ZSR3 168 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 ZNF329Q86UD4 541 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 THNSL2Q86YJ6 484 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 ZNF695Q8IW36 515 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 FOXRED2Q8IWF2 684 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 DEFB107AQ8IZN7 70 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 BBS1Q8NFJ9 593 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 MUC7Q8TAX7 377 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 SLAMF9Q96A28 289 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 BORCS8Q96FH0 119 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 CNN2Q99439 309 aaKnown RBP9.98□□□□□ -0.81
SKA3-206ENST00000475251 MNTQ99583 582 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 CADM1Q9BY67 442 aaKnown RBP9.98□□□□□ -0.81
SKA3-206ENST00000475251 TAGLN3Q9UI15 199 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 OR52A1Q9UKL2 312 aa9.98□□□□□ -0.81
SKA3-206ENST00000475251 A6NIN4 97 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 SERPINE3A8MV23 424 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 F8VVB4 439 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 F8VWA3 439 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 BUB1B-PAK6H3BSN5 160 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 SRSF10O75494 262 aaKnown RBP9.97□□□□□ -0.81
SKA3-206ENST00000475251 MMP23AO75900 390 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 IGHA1P01876 353 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 OSMP13725 252 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 RAB25P57735 213 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 ZNF91Q05481 1191 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 KPNB1Q14974 876 aaKnown RBP9.97□□□□□ -0.81
SKA3-206ENST00000475251 ZNF146Q15072 292 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 HSP90B2PQ58FF3 399 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 CASC10Q5T4H9 136 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 PRAMEF5Q5TYX0 476 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 ZNF322Q6U7Q0 402 aaPredicted RBP9.97□□□□□ -0.81
SKA3-206ENST00000475251 SLC25A26Q70HW3 274 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 DHFR2Q86XF0 187 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 CCDC54Q8NEL0 328 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 OR52N4Q8NGI2 321 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms