RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 GABRA1P14867 456 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 DOC2AQ14183 400 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 CASP8Q14790 479 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 NIPAL1Q6NVV3 410 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 TMEM53Q6P2H8 277 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 CLEC19AQ6UXS0 136 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 FAM122BQ7Z309 247 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 OR4C16Q8NGL9 310 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 TMEM234Q8WY98 164 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 PYURFQ96I23 114 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 OR52B2Q96RD2 323 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 MRPL32Q9BYC8 188 aaKnown RBP0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 FAM192AQ9GZU8 254 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 PRSS16Q9NQE7 514 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 CYB5R1Q9UHQ9 305 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 CRB1P82279 1406 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 CEP170Q5SW79 1584 aa0.43□□□□□ -2.34
PRPF40A-207ENST00000471701 PXDNLA1KZ92 1463 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 A0A1B0GTI1 187 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 LOC389332A0A1B0GUA5 103 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 LECT2O14960 151 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 COX7A2P2O60397 106 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 TAS2R39P59534 338 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 IRF8Q02556 426 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 TTMPQ5BVD1 217 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 EPGNQ6UW88 154 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 EIF3MQ7L2H7 374 aaKnown RBP0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 SSX9Q7RTT3 188 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 DPPA2Q7Z7J5 298 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 MUC15Q8N387 334 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 TCAIMQ8N3R3 496 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 C9orf72Q96LT7 481 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 JSRP1Q96MG2 331 aaPredicted RBP0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 OPALINQ96PE5 141 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 TMED9Q9BVK6 235 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 ZNF436Q9C0F3 470 aaPredicted RBP0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 DEFB129Q9H1M3 183 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 ELOVL6Q9H5J4 265 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 TAS2R9Q9NYW1 312 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 ADA2Q9NZK5 511 aa0.42□□□□□ -2.34
PRPF40A-207ENST00000471701 NOS1P29475 1434 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 A0A1W2PRD5 423 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 H3BN98 237 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 SIVA1O15304 175 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 NAPSAO96009 420 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 GPX1P07203 203 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 G6PCP35575 357 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 GABRA4P48169 554 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 RAD51Q06609 339 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 SPIN4Q56A73 249 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 MLIPQ5VWP3 458 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 ANGPTL8Q6UXH0 198 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 MARCH3Q86UD3 253 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 BBS5Q8N3I7 341 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 CCNYL1Q8N7R7 359 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 UBA3Q8TBC4 463 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 MCUR1Q96AQ8 359 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 METTL26Q96S19 204 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 BPIFA3Q9BQP9 254 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 KLF12Q9Y4X4 402 aa0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 NYNRINQ9P2P1 1898 aaKnown RBP0.41□□□□□ -2.34
PRPF40A-207ENST00000471701 A0A0G2JQZ4 141 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 TRDMT1O14717 391 aaKnown RBP0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 SH2D1AO60880 128 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 OR12D1P0DN82 309 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 CNTFRP26992 372 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 HTR2CP28335 458 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 S100A2P29034 98 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 ZNF404Q494X3 552 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 SPANXN2Q5MJ10 180 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 TRAM1L1Q8N609 369 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 ARL6IP6Q8N6S5 226 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 OR2M3Q8NG83 312 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 RETNLBQ9BQ08 111 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 CCDC77Q9BR77 488 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 SLC19A3Q9BZV2 496 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 LYRM4Q9HD34 91 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 RBM12B-AS1Q9P1G2 102 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 SLC23A2Q9UGH3 650 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 VPREB3Q9UKI3 123 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 HPCAL4Q9UM19 191 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 URGCP-MRPS24S4R325 110 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 NCKAP5O14513 1909 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 COL18A1P39060 1754 aa0.4□□□□□ -2.35
PRPF40A-207ENST00000471701 SLC22A20A6NK97 555 aa0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 DFFAO00273 331 aa0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 MPHOSPH10O00566 681 aaKnown RBP0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 TRAPPC3O43617 180 aa0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 POP7O75817 140 aaKnown RBP0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 SOD3P08294 240 aa0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 TAC1P20366 129 aa0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 CDNFQ49AH0 187 aa0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 C10orf91Q5T1B1 145 aa0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 TMEM215Q68D42 235 aa0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 SELENOHQ8IZQ5 122 aaKnown RBP0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 OR10P1Q8NGE3 313 aa0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 YPEL4Q96NS1 127 aa0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 C20orf144Q9BQM9 153 aa0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 NAA38Q9BRA0 125 aaKnown RBP0.39□□□□□ -2.35
PRPF40A-207ENST00000471701 MFSD1Q9H3U5 465 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms