RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 PEX2P28328 305 aa11.46□□□□□ -0.57
COMMD3-208ENST00000470045 PDZK1IP1Q13113 114 aa11.46□□□□□ -0.57
COMMD3-208ENST00000470045 SPIN3Q5JUX0 258 aa11.46□□□□□ -0.57
COMMD3-208ENST00000470045 TCF23Q7RTU1 214 aa11.46□□□□□ -0.57
COMMD3-208ENST00000470045 RNF144BQ7Z419 303 aa11.46□□□□□ -0.57
COMMD3-208ENST00000470045 FAM58AQ8N1B3 248 aa11.46□□□□□ -0.57
COMMD3-208ENST00000470045 BEND2Q8NDZ0 799 aa11.46□□□□□ -0.57
COMMD3-208ENST00000470045 SNX22Q96L94 193 aa11.46□□□□□ -0.57
COMMD3-208ENST00000470045 PDCD1LG2Q9BQ51 273 aa11.46□□□□□ -0.57
COMMD3-208ENST00000470045 ZCCHC4Q9H5U6 513 aa11.46□□□□□ -0.57
COMMD3-208ENST00000470045 VPREB3Q9UKI3 123 aa11.46□□□□□ -0.57
COMMD3-208ENST00000470045 PKD1L1Q8TDX9 2849 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 hCG_1809904A0A1W2PP81 198 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 A0A1W2PPE2 198 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 A0A1W2PR64 198 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 A0A1W2PRV1 198 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 SPRY1O43609 319 aaPredicted RBP11.45□□□□□ -0.58
COMMD3-208ENST00000470045 ANGPTL7O43827 346 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 KDM4BO94953 1096 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 CLIC3O95833 236 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 CYB5AP00167 134 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 PIPP12273 146 aaPredicted RBP11.45□□□□□ -0.58
COMMD3-208ENST00000470045 DCKP27707 260 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 GBX2P52951 348 aaPredicted RBP11.45□□□□□ -0.58
COMMD3-208ENST00000470045 ADARB1P78563 741 aaKnown RBP11.45□□□□□ -0.58
COMMD3-208ENST00000470045 RCN1Q15293 331 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 LRRC36Q1X8D7 754 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 TTC23Q5W5X9 447 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 ZNF529Q6P280 563 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 GDPGP1Q6ZNW5 385 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 GDPD3Q7L5L3 318 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 SAXO1Q8IYX7 474 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 OR52N4Q8NGI2 321 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 OR5R1Q8NH85 324 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 OR5AK2Q8NH90 309 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 CNIH3Q8TBE1 160 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 C17orf50Q8WW18 174 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 WFDC12Q8WWY7 111 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 RGP1Q92546 391 aaPredicted RBP11.45□□□□□ -0.58
COMMD3-208ENST00000470045 RFT1Q96AA3 541 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 COMMD4Q9H0A8 199 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 HEXA-AS1Q9H8Q6 139 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 RHOFQ9HBH0 211 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 BEX1Q9HBH7 125 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 HMG20AQ9NP66 347 aa11.45□□□□□ -0.58
COMMD3-208ENST00000470045 IRGMA1A4Y4 181 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 CASQ2O14958 399 aaPredicted RBP11.44□□□□□ -0.58
COMMD3-208ENST00000470045 SULT1B1O43704 296 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 PSPNO60542 156 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 INMTO95050 263 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 PAHP00439 452 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 ZNF728P0DKX0 622 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 PRKACAP17612 351 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 ETV1P50549 477 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 GTF2A1P52655 376 aaPredicted RBP11.44□□□□□ -0.58
COMMD3-208ENST00000470045 ERVFRD-1P60508 538 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 ZP1P60852 638 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 MEF2CQ06413 473 aaPredicted RBP11.44□□□□□ -0.58
COMMD3-208ENST00000470045 CDK5R1Q15078 307 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 AANATQ16613 207 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 CCDC58Q4VC31 144 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 PRR31Q5SQ13 230 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 OLFML2AQ68BL7 652 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 XAF1Q6GPH4 301 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 ASPHD2Q6ICH7 369 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 SERPINA12Q8IW75 414 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 SETD9Q8NE22 299 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 SPACA5Q96QH8 159 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 MEGF9Q9H1U4 602 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 ZNF696Q9H7X3 374 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 NEK6Q9HC98 313 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 DIMT1Q9UNQ2 313 aaKnown RBP11.44□□□□□ -0.58
COMMD3-208ENST00000470045 MGAM2Q2M2H8 2515 aa11.44□□□□□ -0.58
COMMD3-208ENST00000470045 CLPSL1A2RUU4 121 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 BTBD17A6NE02 478 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 FAM90A8PA6NJQ4 464 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 ODF3BA8MYP8 253 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 OCM2P0CE71 109 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 OCMP0CE72 109 aaPredicted RBP11.43□□□□□ -0.58
COMMD3-208ENST00000470045 DUSP1P28562 367 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 ERP29P30040 261 aaKnown RBP11.43□□□□□ -0.58
COMMD3-208ENST00000470045 OR3A1P47881 315 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 BMXP51813 675 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 EDDM3BP56851 147 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 IL18R1Q13478 541 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 OGFRL1Q5TC84 451 aaPredicted RBP11.43□□□□□ -0.58
COMMD3-208ENST00000470045 OR2G6Q5TZ20 316 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 RPL22L1Q6P5R6 122 aaKnown RBP11.43□□□□□ -0.58
COMMD3-208ENST00000470045 DHRSXQ8N5I4 330 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 ZSCAN4Q8NAM6 433 aaPredicted RBP11.43□□□□□ -0.58
COMMD3-208ENST00000470045 OR4S1Q8NGB4 309 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 OR5D18Q8NGL1 313 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 OR5D14Q8NGL3 314 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 LINC01006Q8NI28 216 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 CYGBQ8WWM9 190 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 DHDHQ9UQ10 334 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 EXOSC1Q9Y3B2 195 aaKnown RBP11.43□□□□□ -0.58
COMMD3-208ENST00000470045 LINC00312Q9Y6C7 94 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 HSPE1-MOB4S4R3N1 261 aa11.43□□□□□ -0.58
COMMD3-208ENST00000470045 MGST3O14880 152 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms