RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 ARHGAP32A7KAX9 2087 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 IFITM5A6NNB3 132 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 ADAM20O43506 726 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 KNG1P01042 644 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 VSIG8P0DPA2 414 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 RPS2P15880 293 aaKnown RBP12.31□□□□□ -0.44
COL9A3-209ENST00000469852 RPS19P39019 145 aaKnown RBP12.31□□□□□ -0.44
COL9A3-209ENST00000469852 GABRA2P47869 451 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 FGF12P61328 243 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 PLA2G7Q13093 441 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 DGUOKQ16854 277 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 ATPAF1Q5TC12 328 aaPredicted RBP12.31□□□□□ -0.44
COL9A3-209ENST00000469852 ELP2Q6IA86 826 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 ZNF841Q6ZN19 808 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 ZNF788Q6ZQV5 615 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 TPRA1Q86W33 373 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 Q8IYB0 196 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 OR6M1Q8NGM8 313 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 NDNFQ8TB73 568 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 FAM46BQ96A09 425 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 BANF2Q9H503 90 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 MAB21L2Q9Y586 359 aa12.31□□□□□ -0.44
COL9A3-209ENST00000469852 TMPRSS2O15393 492 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 IGHV4-31P0DP07 118 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 ZFP36P26651 326 aaKnown RBP12.3□□□□□ -0.44
COL9A3-209ENST00000469852 PRDX2P32119 198 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 QRFPP83859 136 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 UNC119Q13432 240 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 ZNF146Q15072 292 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 RAB11BQ15907 218 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 TMEM249Q2WGJ8 235 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 SFXN4Q6P4A7 337 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 ZNRF1Q8ND25 227 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 OR51D1Q8NGF3 324 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 OR51T1Q8NGJ9 327 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 NEIL1Q96FI4 390 aaPredicted RBP12.3□□□□□ -0.44
COL9A3-209ENST00000469852 S100A13Q99584 98 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 KAAG1Q9UBP8 84 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 MIOXQ9UGB7 285 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 STEAP1Q9UHE8 339 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 PCDHB10Q9UN67 800 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 CEPT1Q9Y6K0 416 aa12.3□□□□□ -0.44
COL9A3-209ENST00000469852 NOTOA8MTQ0 251 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 KIAA1324LA8MWY0 1029 aaPredicted RBP12.29□□□□□ -0.44
COL9A3-209ENST00000469852 AIPO00170 330 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 SIGLEC5O15389 551 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 PHF1O43189 567 aaPredicted RBP12.29□□□□□ -0.44
COL9A3-209ENST00000469852 CRTAPO75718 401 aaPredicted RBP12.29□□□□□ -0.44
COL9A3-209ENST00000469852 HAND1O96004 215 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 CD99P14209 185 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 CFPP27918 469 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 SERPINB10P48595 397 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 COL10A1Q03692 680 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 KRTAP1-1Q07627 177 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 IKZF1Q13422 519 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 BLMHQ13867 455 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 SPCS2Q15005 226 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 KCNJ8Q15842 424 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 Q6P435 159 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 OSR2Q8N2R0 312 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 FAM3DQ96BQ1 224 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 SDSLQ96GA7 329 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 C1orf159Q96HA4 380 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 RBM38Q9H0Z9 239 aaKnown RBP12.29□□□□□ -0.44
COL9A3-209ENST00000469852 RHOFQ9HBH0 211 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 LPAR2Q9HBW0 351 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 DAPK2Q9UIK4 370 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 MALRD1Q5VYJ5 2156 aa12.29□□□□□ -0.44
COL9A3-209ENST00000469852 TMEM82A0PJX8 343 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 NKX6-3A6NJ46 265 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 TMEM14DPA8MWL7 114 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 SIRPB1O00241 398 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 DVL1O14640 695 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 GEMIN2O14893 280 aaKnown RBP12.28□□□□□ -0.44
COL9A3-209ENST00000469852 LDLRAD4O15165 306 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 NDUFA2O43678 99 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 BPNT1O95861 308 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 MPIG6BO95866 241 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 OR2H2O95918 312 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 CSTBP04080 98 aaKnown RBP12.28□□□□□ -0.44
COL9A3-209ENST00000469852 ARSBP15848 533 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 MGMTP16455 207 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 HOXB4P17483 251 aaPredicted RBP12.28□□□□□ -0.44
COL9A3-209ENST00000469852 PITPNBP48739 271 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 PSMD7P51665 324 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 RBM11P57052 281 aaKnown RBP12.28□□□□□ -0.44
COL9A3-209ENST00000469852 C2orf76Q3KRA6 126 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 SPIN3Q5JUX0 258 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 BIVMQ86UB2 503 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 OR8B3Q8NGG8 313 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 RAB39BQ96DA2 213 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 C18orf12Q96KH6 178 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 OR8B2Q96RD0 313 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 SMR3AQ99954 134 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 BARHL1Q9BZE3 327 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 DNTTIP1Q9H147 329 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 LIN7BQ9HAP6 207 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 ST3GAL6Q9Y274 331 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 DOCK11Q5JSL3 2073 aa12.28□□□□□ -0.44
COL9A3-209ENST00000469852 NIPBLQ6KC79 2804 aaeCLIP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms