RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 SPSB4Q96A44 273 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 SLC25A38Q96DW6 304 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 PLEKHA1Q9HB21 404 aa12.15□□□□□ -0.46
COL27A1-203ENST00000468565 MRPL15Q9P015 296 aaKnown RBP12.15□□□□□ -0.46
COL27A1-203ENST00000468565 RBMX2Q9Y388 322 aaKnown RBP12.15□□□□□ -0.46
COL27A1-203ENST00000468565 GGT3PA6NGU5 568 aa12.14□□□□□ -0.47
COL27A1-203ENST00000468565 PHF1O43189 567 aaPredicted RBP12.14□□□□□ -0.47
COL27A1-203ENST00000468565 FSTL3O95633 263 aa12.14□□□□□ -0.47
COL27A1-203ENST00000468565 SLC2A1P11166 492 aa12.14□□□□□ -0.47
COL27A1-203ENST00000468565 M6PRP20645 277 aa12.14□□□□□ -0.47
COL27A1-203ENST00000468565 GATA3P23771 443 aa12.14□□□□□ -0.47
COL27A1-203ENST00000468565 BTCP35070 178 aa12.14□□□□□ -0.47
COL27A1-203ENST00000468565 MRPS10P82664 201 aaKnown RBP12.14□□□□□ -0.47
COL27A1-203ENST00000468565 SIGIRRQ6IA17 410 aa12.14□□□□□ -0.47
COL27A1-203ENST00000468565 IZUMO1Q8IYV9 350 aa12.14□□□□□ -0.47
COL27A1-203ENST00000468565 TMEM106AQ96A25 262 aa12.14□□□□□ -0.47
COL27A1-203ENST00000468565 FYTTD1Q96QD9 318 aaKnown RBP12.14□□□□□ -0.47
COL27A1-203ENST00000468565 PATZ1Q9HBE1 687 aaKnown RBP12.14□□□□□ -0.47
COL27A1-203ENST00000468565 OR5V1Q9UGF6 321 aa12.14□□□□□ -0.47
COL27A1-203ENST00000468565 PCDHB10Q9UN67 800 aa12.14□□□□□ -0.47
COL27A1-203ENST00000468565 PPIAL4EA0A075B759 164 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 PPIAL4CA0A0B4J2A2 164 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 C5orf63A6NC05 138 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 LRRC30A6NM36 301 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 F5H0A9 414 aaPredicted RBP12.13□□□□□ -0.47
COL27A1-203ENST00000468565 PPIAL4DF5H284 164 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 GABARAPH6UMI1 98 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 J3QLI3 93 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 GMDSO60547 372 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 FOXH1O75593 365 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 ECDO95905 644 aaPredicted RBP12.13□□□□□ -0.47
COL27A1-203ENST00000468565 TCRBP04435 133 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 PPIAL4FP0DN26 164 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 ADRA2CP18825 462 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 CPT2P23786 658 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 AP3S2P59780 193 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 IFITM2Q01629 132 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 MAB21L1Q13394 359 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 PRSS45Q7RTY3 260 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 MOGAT3Q86VF5 341 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 C1orf87Q8N0U7 546 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 OR52H1Q8NGJ2 320 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 Q8TCH9 128 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 TMEM158Q8WZ71 300 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 PTBP3O95758 552 aaKnown RBP12.13□□□□□ -0.47
COL27A1-203ENST00000468565 GDNFP39905 211 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 CLDN12P56749 244 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 KLF9Q13886 244 aaPredicted RBP12.13□□□□□ -0.47
COL27A1-203ENST00000468565 CDK10Q15131 360 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 OR8G1Q15617 311 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 TMEM69Q5SWH9 247 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 FAHD2BQ6P2I3 314 aaPredicted RBP12.13□□□□□ -0.47
COL27A1-203ENST00000468565 SPATA3Q8NHX4 192 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 FCAMRQ8WWV6 532 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 FAHD2AQ96GK7 314 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 RNF170Q96K19 258 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 ADAT1Q9BUB4 502 aaKnown RBP12.13□□□□□ -0.47
COL27A1-203ENST00000468565 NIPAL2Q9H841 368 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 NUDT15Q9NV35 164 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 STEAP1Q9UHE8 339 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 GTF2A1LQ9UNN4 478 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 FOXJ3Q9UPW0 622 aa12.13□□□□□ -0.47
COL27A1-203ENST00000468565 POLR3KQ9Y2Y1 108 aaPredicted RBP12.13□□□□□ -0.47
COL27A1-203ENST00000468565 TRAV6A0A075B6T7 132 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 TRAV8-7A0A075B6U6 113 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 NAP1L6A6NFF2 107 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 A8MXK9 166 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 CYB5R3P00387 301 aaPredicted RBP12.12□□□□□ -0.47
COL27A1-203ENST00000468565 MAS1P04201 325 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 H2BFMP0C1H6 154 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 CA6P23280 308 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 ERP29P30040 261 aaKnown RBP12.12□□□□□ -0.47
COL27A1-203ENST00000468565 RBMXP38159 391 aaKnown RBP12.12□□□□□ -0.47
COL27A1-203ENST00000468565 PMELP40967 661 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 MNDAP41218 407 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 RAG2P55895 527 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 ODF4Q2M2E3 257 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 BCL2L15Q5TBC7 163 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 DCAF12L2Q5VW00 463 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 PLPP7Q8NBV4 271 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 OR56B2PQ8NGI1 322 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 OR10AC1Q8NH08 325 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 TMPRSS13Q9BYE2 586 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 MED28Q9H204 178 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 AUNIPQ9H7T9 357 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 DIABLOQ9NR28 239 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 MCUBQ9NWR8 336 aa12.12□□□□□ -0.47
COL27A1-203ENST00000468565 C7orf66A4D0T2 115 aa12.11□□□□□ -0.47
COL27A1-203ENST00000468565 RNF212BA8MTL3 300 aa12.11□□□□□ -0.47
COL27A1-203ENST00000468565 IRF2P14316 349 aa12.11□□□□□ -0.47
COL27A1-203ENST00000468565 CFPP27918 469 aa12.11□□□□□ -0.47
COL27A1-203ENST00000468565 ZNF121P58317 390 aaPredicted RBP12.11□□□□□ -0.47
COL27A1-203ENST00000468565 MZT1Q08AG7 82 aa12.11□□□□□ -0.47
COL27A1-203ENST00000468565 SCGB2A2Q13296 93 aa12.11□□□□□ -0.47
COL27A1-203ENST00000468565 UTS2BQ765I0 119 aa12.11□□□□□ -0.47
COL27A1-203ENST00000468565 BTN2A1Q7KYR7 527 aa12.11□□□□□ -0.47
COL27A1-203ENST00000468565 CATSPERDQ86XM0 798 aa12.11□□□□□ -0.47
COL27A1-203ENST00000468565 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.11□□□□□ -0.47
COL27A1-203ENST00000468565 OR11L1Q8NGX0 322 aa12.11□□□□□ -0.47
COL27A1-203ENST00000468565 SGK3Q96BR1 496 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms