RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 ZNF774Q6NX45 483 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 DHRS11Q6UWP2 260 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 SRXN1Q9BYN0 137 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 NAA60Q9H7X0 242 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 A0A1B0GV90 55 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 A0A1W2PPE3 182 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 LCATP04180 440 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 SSR4P51571 173 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 HGFACQ04756 655 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 TMEM187Q14656 261 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 RAB35Q15286 201 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 CNN3Q15417 329 aaKnown RBP13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 RTN4IP1Q8WWV3 396 aaPredicted RBP13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 BSCL2Q96G97 398 aaPredicted RBP13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 AKR1E2Q96JD6 320 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 IMMP1LQ96LU5 166 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 WDR54Q9H977 334 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 POMT1Q9Y6A1 747 aa13.71□□□□□ -0.21
TSPAN4-211ENST00000468468 FAM221AA4D161 298 aa13.71□□□□□ -0.22
TSPAN4-211ENST00000468468 KLF7O75840 302 aaPredicted RBP13.71□□□□□ -0.22
TSPAN4-211ENST00000468468 CYC1P08574 325 aa13.71□□□□□ -0.22
TSPAN4-211ENST00000468468 DTYMKP23919 212 aa13.71□□□□□ -0.22
TSPAN4-211ENST00000468468 GPX4P36969 197 aaPredicted RBP13.71□□□□□ -0.22
TSPAN4-211ENST00000468468 TSPO2Q5TGU0 170 aa13.71□□□□□ -0.22
TSPAN4-211ENST00000468468 TMEM156Q8N614 296 aa13.71□□□□□ -0.22
TSPAN4-211ENST00000468468 UBAC2Q8NBM4 344 aa13.71□□□□□ -0.22
TSPAN4-211ENST00000468468 BORCS8Q96FH0 119 aa13.71□□□□□ -0.22
TSPAN4-211ENST00000468468 MARS2Q96GW9 593 aaKnown RBP13.71□□□□□ -0.22
TSPAN4-211ENST00000468468 E5RGE8 158 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 SYNGR3O43761 229 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 DIRAS3O95661 229 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 GLI4P10075 376 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 CHATP28329 748 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 RBP2P50120 134 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 RAC1P63000 192 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 PHLDA2Q53GA4 152 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 LYZL2Q7Z4W2 148 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 NSG2Q9Y328 171 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 FAM157AC9JC47 383 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 GEMIN2O14893 280 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 PATE4P0C8F1 98 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 COX6A1P12074 109 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 SKA3Q8IX90 412 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 OR1F12Q8NHA8 337 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 SECTM1Q8WVN6 248 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 CRLF2Q9HC73 371 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 FAM212BQ9NTI7 297 aaPredicted RBP13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 HS3ST3B1Q9Y662 390 aa13.7□□□□□ -0.22
TSPAN4-211ENST00000468468 TSPAN15O95858 294 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 S100A8P05109 93 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 TRA2AQ13595 282 aaKnown RBP eCLIP13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 EXT1Q16394 746 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 PIGYQ3MUY2 71 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 OR2B11Q5JQS5 317 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 SLC22A25Q6T423 547 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 AKR7LQ8NHP1 331 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 LYPD6BQ8NI32 183 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 ZNF700Q9H0M5 742 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 CCDC187A0A096LP49 1063 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 COLCA2A8K830 154 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 XRCC2O43543 280 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 NRASP01111 189 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 PPT1P50897 306 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 ETV3LQ6ZN32 361 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 LHFPL2Q6ZUX7 228 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 OR10AD1Q8NGE0 317 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 GALNT14Q96FL9 552 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 SMCO4Q9NRQ5 59 aa13.69□□□□□ -0.22
TSPAN4-211ENST00000468468 IGKV1-12A0A0C4DH73 117 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 C9J4A7 227 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 CBR3O75828 277 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 IGKV1D-12P01611 117 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 FBP1P09467 338 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 FBXL14Q8N1E6 418 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 GPR137CQ8N3F9 429 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 OR5L1Q8NGL2 311 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 SUCNR1Q9BXA5 334 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 WFDC1Q9HC57 220 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 CACFD1Q9UGQ2 172 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 C5orf52A6NGY3 159 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 GPR37O15354 613 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 NME2P1O60361 137 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 CST2P09228 141 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 B4GALT1P15291 398 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 ZNF32P17041 273 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 NTF4P34130 210 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 PDCD1Q15116 288 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 MIDNQ504T8 468 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 RPS19BP1Q86WX3 136 aaKnown RBP13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 OSR2Q8N2R0 312 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 RBM14Q96PK6 669 aaKnown RBP13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 PFDN5Q99471 154 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 ARV1Q9H2C2 271 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 BCO1Q9HAY6 547 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 SLC2A9Q9NRM0 540 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 KPTNQ9Y664 436 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 CELSR3Q9NYQ7 3312 aa13.68□□□□□ -0.22
TSPAN4-211ENST00000468468 BORCS7-ASMTA0A0B4J1R7 106 aa13.67□□□□□ -0.22
TSPAN4-211ENST00000468468 TERTO14746 1132 aaKnown RBP13.67□□□□□ -0.22
TSPAN4-211ENST00000468468 GPR137BO60478 399 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms