RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 ATP6AP1LQ52LC2 224 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 IDNKQ5T6J7 187 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 HCP5Q6MZN7 132 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 FAHD1Q6P587 224 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 TPGS1Q6ZTW0 290 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 USP50Q70EL3 339 aaPredicted RBP0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 KRTAP13-1Q8IUC0 172 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 CCNYL1Q8N7R7 359 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 OR6K2Q8NGY2 324 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 OR51Q1Q8NH59 317 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 CCL17Q92583 94 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 ZNF75CPQ92670 426 aaPredicted RBP0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 ADTRPQ96IZ2 230 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 PPP1R36Q96LQ0 422 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 NAP1L5Q96NT1 182 aaPredicted RBP0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 QKIQ96PU8 341 aaKnown RBP eCLIP0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 OR2M4Q96R27 311 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 OR2V2Q96R30 315 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 OR2A7Q96R45 310 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 PKMYT1Q99640 499 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 PLEKHA1Q9HB21 404 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 OR2S2Q9NQN1 319 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 RBM12B-AS1Q9P1G2 102 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 RAB23Q9ULC3 237 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 INSIG2Q9Y5U4 225 aa0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 BAZ2AQ9UIF9 1905 aaKnown RBP0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 COL5A1P20908 1838 aaPredicted RBP0.85□□□□□ -2.27
NUCKS1-202ENST00000464938 ARAP3Q8WWN8 1544 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 BRD4O60885 1362 aaPredicted RBP0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 TMEM131Q92545 1883 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 BOLA2-SMG1P6H3BVE0 249 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 UPK2O00526 184 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 SPOPO43791 374 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 ENTPD6O75354 484 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 DHRS3O75911 302 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 KLHL2O95198 593 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 IGLV6-57P01721 117 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 RLN2P04090 185 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 CD9P21926 228 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 FUSP35637 526 aaKnown RBP eCLIP0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 ARR3P36575 388 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 DNASE1L1P49184 302 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 ACOT2P49753 483 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 NUDT2P50583 147 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 TNFRSF9Q07011 255 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 C2orf80Q0P641 193 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 BAMBIQ13145 260 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 IHHQ14623 411 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 WDR43Q15061 677 aaKnown RBP eCLIP0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 TNXAQ16473 311 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 PSG3Q16557 428 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 DEFB134Q4QY38 66 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 C6orf183Q5T699 404 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 AMMECR1LQ6DCA0 310 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 THOC7Q6I9Y2 204 aaKnown RBP0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 Q6ZT83 130 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 TCF24Q7RTU0 167 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 TMEM144Q7Z5S9 345 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 LINC00596Q86U02 117 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 ZFP82Q8N141 532 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 SPICQ8N5J4 248 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 ATPAF2Q8N5M1 289 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 OR2M3Q8NG83 312 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 OR2Y1Q8NGV0 311 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 OR8S1Q8NH09 359 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 CDKL2Q92772 493 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 LRRC39Q96DD0 335 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 CPB2Q96IY4 423 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 ZNF396Q96N95 335 aaPredicted RBP0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 BIRC8Q96P09 236 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 VAT1Q99536 393 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 SRRQ9GZT4 340 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 NXF2Q9GZY0 626 aaKnown RBP0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 RAB1BQ9H0U4 201 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 DUSP21Q9H596 190 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 NLE1Q9NVX2 485 aaPredicted RBP0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 SDHAF2Q9NX18 166 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 ZNF586Q9NXT0 402 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 CLEC2DQ9UHP7 191 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 CYB5R1Q9UHQ9 305 aa0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 ZNF443Q9Y2A4 671 aaPredicted RBP0.84□□□□□ -2.27
NUCKS1-202ENST00000464938 THADAQ6YHU6 1953 aa0.84□□□□□ -2.28
NUCKS1-202ENST00000464938 NRCAMQ92823 1304 aa0.84□□□□□ -2.28
NUCKS1-202ENST00000464938 SYNRGQ9UMZ2 1314 aa0.84□□□□□ -2.28
NUCKS1-202ENST00000464938 MYO15BQ96JP2 1530 aa0.84□□□□□ -2.28
NUCKS1-202ENST00000464938 IGHV3-21A0A0B4J1V1 117 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 A0A1B0GU33 70 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 PGPA6NDG6 321 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 CD300LBA8K4G0 201 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 A8MWP4 228 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 PLPP3O14495 311 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 COX7A2P2O60397 106 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 SOX14O95416 240 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 CXorf1O96002 111 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 CA2P00918 260 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 IGKV1D-33P01593 117 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 IGKV1-33P01594 117 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 IGHV3-53P01767 116 aa0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 HLA-AP01891 365 aaKnown RBP0.83□□□□□ -2.28
NUCKS1-202ENST00000464938 CDK1P06493 297 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms