RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 GJC3Q8NFK1 279 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 OR51A2Q8NGJ7 313 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 SLC25A40Q8TBP6 338 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 OR51E1Q8TCB6 317 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 SGK3Q96BR1 496 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 ADAT3Q96EY9 351 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-204ENST00000463622 ZNF799Q96GE5 643 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 COG8Q96MW5 612 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 SLC30A2Q9BRI3 323 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 CENPOQ9BU64 300 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 TMED9Q9BVK6 235 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 MND1Q9BWT6 205 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 MRPS26Q9BYN8 205 aaKnown RBP3.01□□□□□ -1.93
SCFD1-204ENST00000463622 PBOV1Q9GZY1 135 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 HDHD2Q9H0R4 259 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 INPP5EQ9NRR6 644 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 BABAM2Q9NXR7 383 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 PTTG3PQ9NZH4 202 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 OR52A1Q9UKL2 312 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 RYR3Q15413 4870 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 TRAV8-7A0A075B6U6 113 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 IGHV3-64DA0A0J9YX35 117 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 TRBV5-5A0A0J9YX44 114 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 hCG_38984A0A1B0GV85 526 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 TMEM269A0A1B0GVZ9 245 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 LOC110117498-PIK3R3F6TDL0 507 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 H0YL77 283 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 TRIM77I1YAP6 450 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 HSPB6O14558 160 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 ABCD4O14678 606 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 SC5DO75845 299 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 SULT1C4O75897 302 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 ACTL6BO94805 426 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 FARS2O95363 451 aaKnown RBP3.01□□□□□ -1.93
SCFD1-204ENST00000463622 KRT8P05787 483 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 NR2C1P13056 603 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 ADRA2CP18825 462 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 PTAFRP25105 342 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 PCP4P48539 62 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 RGS6P49758 472 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 FABP6P51161 128 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 BLVRAP53004 296 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 CAV3P56539 151 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 NCS1P62166 190 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 ACTG1P63261 375 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 CSNK2BP67870 215 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 ACSM1Q08AH1 577 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 TPBGQ13641 420 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 ALKBH1Q13686 389 aaKnown RBP3.01□□□□□ -1.93
SCFD1-204ENST00000463622 GK2Q14410 553 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-204ENST00000463622 CTF1Q16619 201 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 GPR107Q5VW38 600 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 TMEM53Q6P2H8 277 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 METAP1DQ6UB28 335 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-204ENST00000463622 Q6ZR03 302 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 C16orf82Q7Z2V1 217 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 WDR86Q86TI4 376 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 ELMOD2Q8IZ81 293 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 OR5AS1Q8N127 324 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 ZCCHC24Q8N2G6 241 aaKnown RBP3.01□□□□□ -1.93
SCFD1-204ENST00000463622 NEXN-AS1Q8NBZ9 246 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 OR1J2Q8NGS2 313 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 ASB17Q8WXJ9 295 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 GHSRQ92847 366 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 SMIM19Q96E16 107 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 FAM71F1Q96KD3 344 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-204ENST00000463622 FUNDC2Q9BWH2 189 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 C1QTNF5Q9BXJ0 243 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 MROQ9BYG7 248 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 OR2J1Q9GZK6 312 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 KCNN2Q9H2S1 579 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 KCNK15Q9H427 330 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 MYOZ1Q9NP98 299 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-204ENST00000463622 GPR84Q9NQS5 396 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 NUFIP1Q9UHK0 495 aaKnown RBP3.01□□□□□ -1.93
SCFD1-204ENST00000463622 BLOC1S6Q9UL45 172 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 ERGIC3Q9Y282 383 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 AMDHD2Q9Y303 409 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 RHBDD3Q9Y3P4 386 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 SNX5Q9Y5X3 404 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 CEPT1Q9Y6K0 416 aa3.01□□□□□ -1.93
SCFD1-204ENST00000463622 IGKV1-27A0A075B6S5 117 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 A0A0B4J203 849 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 IGKV1-9A0A0C4DH69 117 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 TRBV2A0A0J9YWF9 115 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 IRGMA1A4Y4 181 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 LRP5LA4QPB2 252 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 SNTNA6NMZ2 147 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 GABRPO00591 440 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 PHYHO14832 338 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 PLPP2O43688 288 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 MRPS14O60783 128 aaKnown RBP3□□□□□ -1.93
SCFD1-204ENST00000463622 GABARAPO95166 117 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 COX5BP10606 129 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 CD36P16671 472 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 CCL1P22362 96 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 HSD11B1P28845 292 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 IL2RGP31785 369 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 APLNRP35414 380 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 ARR3P36575 388 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms