RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 PP6455Q8WZ26 134 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 ST8SIA4Q92187 359 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 FGGYQ96C11 551 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 SDSLQ96GA7 329 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 MRPL48Q96GC5 212 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 PDCD1LG2Q9BQ51 273 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 PKIBQ9C010 78 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 PLCXD1Q9NUJ7 323 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 DNAJB11Q9UBS4 358 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 PSORS1C1Q9UIG5 152 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 HHLA2Q9UM44 414 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 ZNF281Q9Y2X9 895 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 EXOSC1Q9Y3B2 195 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 MAB21L2Q9Y586 359 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 KPTNQ9Y664 436 aa6.47□□□□□ -1.37
CDC42BPA-210ENST00000462553 IRGMA1A4Y4 181 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 NKX6-3A6NJ46 265 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 RFPL4AA6NLU0 287 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 RFPL4AL1F8VTS6 287 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 H0YJX3 145 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 OGG1O15527 345 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 ECDO95905 644 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 ACAA1P09110 424 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 CCDC159P0C7I6 412 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 AZGP1P25311 298 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 FUT6P51993 359 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 GBX2P52951 348 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 CAV3P56539 151 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 ST3GAL4Q11206 333 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 MRPL28Q13084 256 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 IKZF1Q13422 519 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 CNN3Q15417 329 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 SMIM21Q3B7S5 101 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 FBLN7Q53RD9 439 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 ZNF529Q6P280 563 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 Q6ZPA2 131 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 SLC36A1Q7Z2H8 476 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 PNKDQ8N490 385 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 ZNF676Q8N7Q3 588 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 DNAAF1Q8NEP3 725 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 OR13C3Q8NGS6 347 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 OR13C9Q8NGT0 318 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 OR52N1Q8NH53 320 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 ZNF671Q8TAW3 534 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 SGCDQ92629 289 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 TNFRSF14Q92956 283 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 SLAMF9Q96A28 289 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 TMEM80Q96HE8 168 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 PGLYRP3Q96LB9 341 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 SPACA5Q96QH8 159 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 DCTN5Q9BTE1 182 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 DPAGT1Q9H3H5 408 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 ELL3Q9HB65 397 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 SIRT7Q9NRC8 400 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 PAK1IP1Q9NWT1 392 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 RASL12Q9NYN1 266 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 MTCH1Q9NZJ7 389 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 CNOT2Q9NZN8 540 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 ONECUT1Q9UBC0 465 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 IL36RNQ9UBH0 155 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 SLC7A11Q9UPY5 501 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 POLDIP2Q9Y2S7 368 aa6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 DYNC2H1Q8NCM8 4307 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-210ENST00000462553 IGKV1-12A0A0C4DH73 117 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 TRBV2A0A0J9YWF9 115 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 EFCAB10A6NFE3 127 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 SLC1A7O00341 560 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 NPFFO15130 113 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 NDUFB3O43676 98 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 NXPH2O95156 264 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 IGKV1D-12P01611 117 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 PRB2P02812 416 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 FBP1P09467 338 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 CSF1P09603 554 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 ZNF20P17024 532 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 BCL3P20749 454 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 C21orf33P30042 268 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 GABRA2P47869 451 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 NPBWR2P48146 333 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 RBP2P50120 134 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 ZP1P60852 638 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 RPS11P62280 158 aaKnown RBP eCLIP6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 CCDC58Q4VC31 144 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 LRRC10Q5BKY1 277 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 DMKNQ6E0U4 476 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 RPL22L1Q6P5R6 122 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 LHFPL2Q6ZUX7 228 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 SLC25A26Q70HW3 274 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 AHSA2Q719I0 299 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 PARP16Q8N5Y8 322 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 ZFP41Q8N8Y5 198 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 ZNRF1Q8ND25 227 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 BPIFB6Q8NFQ5 453 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 OR51A2Q8NGJ7 313 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 OR13C5Q8NGS8 318 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 OR5AK2Q8NH90 309 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 PPP1R35Q8TAP8 253 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 HAVCR2Q8TDQ0 301 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 C17orf50Q8WW18 174 aa6.45□□□□□ -1.38
CDC42BPA-210ENST00000462553 RFT1Q96AA3 541 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms