RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 TMEM45BQ96B21 275 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 PGAM5Q96HS1 289 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 METTL8Q9H825 291 aaKnown RBP10.78□□□□□ -0.68
COL4A6-204ENST00000461897 RHOFQ9HBH0 211 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 CRLF2Q9HC73 371 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 CST4P01036 141 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 IFNA2P01563 188 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 APOC1P02654 83 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 FCGR3AP08637 254 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 PI3P19957 117 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 PVALBP20472 110 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-204ENST00000461897 MRPS34P82930 218 aaKnown RBP10.78□□□□□ -0.68
COL4A6-204ENST00000461897 RBM39Q14498 530 aaKnown RBP10.78□□□□□ -0.68
COL4A6-204ENST00000461897 RSPO1Q2MKA7 263 aaPredicted RBP10.78□□□□□ -0.68
COL4A6-204ENST00000461897 BTNL8Q6UX41 500 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 SKA3Q8IX90 412 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 CYYR1Q96J86 154 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 ST6GALNAC5Q9BVH7 336 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 PARP11Q9NR21 331 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 ZFP57Q9NU63 452 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 MCTS1Q9ULC4 181 aaKnown RBP10.78□□□□□ -0.68
COL4A6-204ENST00000461897 EDARQ9UNE0 448 aa10.78□□□□□ -0.68
COL4A6-204ENST00000461897 C14orf166Q9Y224 244 aaKnown RBP10.78□□□□□ -0.68
COL4A6-204ENST00000461897 TRGV5A0A0B4J1U4 118 aa10.77□□□□□ -0.69
COL4A6-204ENST00000461897 TRAV17A0A0B4J275 112 aa10.77□□□□□ -0.69
COL4A6-204ENST00000461897 C5orf63A6NC05 138 aa10.77□□□□□ -0.69
COL4A6-204ENST00000461897 SDCBPO00560 298 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-204ENST00000461897 HTR3BO95264 441 aa10.77□□□□□ -0.69
COL4A6-204ENST00000461897 SYNGR4O95473 234 aa10.77□□□□□ -0.69
COL4A6-204ENST00000461897 MUC1P15941 1255 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-204ENST00000461897 PRKACAP17612 351 aa10.77□□□□□ -0.69
COL4A6-204ENST00000461897 GUCA1AP43080 201 aaPredicted RBP10.77□□□□□ -0.69
COL4A6-204ENST00000461897 NPBWR1P48145 328 aa10.77□□□□□ -0.69
COL4A6-204ENST00000461897 CHRFAM7AQ494W8 412 aa10.77□□□□□ -0.69
COL4A6-204ENST00000461897 TMEM88Q6PEY1 159 aa10.77□□□□□ -0.69
COL4A6-204ENST00000461897 LRRC18Q8N456 261 aa10.77□□□□□ -0.69
COL4A6-204ENST00000461897 WDYHV1Q96HA8 205 aa10.77□□□□□ -0.69
COL4A6-204ENST00000461897 Q96M66 194 aa10.77□□□□□ -0.69
COL4A6-204ENST00000461897 MICU1Q9BPX6 476 aa10.77□□□□□ -0.69
COL4A6-204ENST00000461897 TREM1Q9NP99 234 aa10.77□□□□□ -0.69
COL4A6-204ENST00000461897 PRR13Q9NZ81 148 aa10.77□□□□□ -0.69
COL4A6-204ENST00000461897 PQLC2LA1A4F0 135 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 CRYM-AS1A6NIL9 109 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 FAM157AC9JC47 383 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 MTRF1O75570 445 aaKnown RBP10.76□□□□□ -0.69
COL4A6-204ENST00000461897 DEDDO75618 318 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 RIPPLY2Q5TAB7 128 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 FAM27BQ5VT28 67 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 SHEQ5VZ18 495 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 RPL7L1Q6DKI1 246 aaKnown RBP10.76□□□□□ -0.69
COL4A6-204ENST00000461897 CBLN2Q8IUK8 224 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 TUSC5Q8IXB3 177 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 GPR137CQ8N3F9 429 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 CPT1CQ8TCG5 803 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 FBXO17Q96EF6 278 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 ARV1Q9H2C2 271 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 TAF9BQ9HBM6 251 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 TMEM38BQ9NVV0 291 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 MLXQ9UH92 298 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 HSF4Q9ULV5 492 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 WASF3Q9UPY6 502 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 NOSIPQ9Y314 301 aaKnown RBP10.76□□□□□ -0.69
COL4A6-204ENST00000461897 ATMQ13315 3056 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 RNASEK-C17orf49H0YIS7 233 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 FBXO24O75426 580 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 WISP2O76076 250 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 JTBO76095 146 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 IGHG3P01860 377 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 FOLR2P14207 255 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 RBMXP38159 391 aaKnown RBP10.76□□□□□ -0.69
COL4A6-204ENST00000461897 LPAR6P43657 344 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 RAB13P51153 203 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 FAM3AP98173 230 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 KDF1Q8NAX2 398 aaPredicted RBP10.76□□□□□ -0.69
COL4A6-204ENST00000461897 ADAT1Q9BUB4 502 aaKnown RBP10.76□□□□□ -0.69
COL4A6-204ENST00000461897 SCNM1Q9BWG6 230 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 RNF122Q9H9V4 155 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 BCO1Q9HAY6 547 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 GPR35Q9HC97 309 aa10.76□□□□□ -0.69
COL4A6-204ENST00000461897 FREM1Q5H8C1 2179 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 IGKV1D-8A0A087WSZ0 117 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 URB1O60287 2271 aaKnown RBP10.75□□□□□ -0.69
COL4A6-204ENST00000461897 MRPL33O75394 65 aaKnown RBP10.75□□□□□ -0.69
COL4A6-204ENST00000461897 IGHV3-9P01782 118 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 HOXB5P09067 269 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 B4GALT1P15291 398 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 FAHP16930 419 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 DTYMKP23919 212 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 RPL12P30050 165 aaKnown RBP10.75□□□□□ -0.69
COL4A6-204ENST00000461897 F2RL1P55085 397 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 UCP2P55851 309 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 CTAG1AP78358 180 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 IAH1Q2TAA2 248 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-204ENST00000461897 CEACAM16Q2WEN9 425 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 TSPO2Q5TGU0 170 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 ASCL4Q6XD76 172 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 SGPP2Q8IWX5 399 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 UBAC2Q8NBM4 344 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 SEMA6DQ8NFY4 1073 aa10.75□□□□□ -0.69
COL4A6-204ENST00000461897 SPSB1Q96BD6 273 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms