RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 NEIL3Q8TAT5 605 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 OIT3Q8WWZ8 545 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 LRR1Q96L50 414 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 TSNAXQ99598 290 aaKnown RBP4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 PRRT1Q99946 306 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 CMSS1Q9BQ75 279 aaKnown RBP4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 SPXQ9BT56 116 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 ABHD6Q9BV23 337 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 SRXN1Q9BYN0 137 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 LAT2Q9GZY6 243 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 COMMD4Q9H0A8 199 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 FAM234AQ9H0X4 552 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 TMEM38AQ9H6F2 299 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 MTHFD2LQ9H903 347 aaPredicted RBP4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 BCL2L10Q9HD36 194 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 ACOT13Q9NPJ3 140 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 PDP1Q9P0J1 537 aaPredicted RBP4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 RHCGQ9UBD6 479 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 ERRFI1Q9UJM3 462 aaPredicted RBP4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 MRTO4Q9UKD2 239 aaKnown RBP4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 RPH3ALQ9UNE2 315 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 MOKQ9UQ07 419 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 AURKCQ9UQB9 309 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 RNF6Q9Y252 685 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 PAM16Q9Y3D7 125 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 FAM215AQ9Y5M1 114 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 V9GYH0 126 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 ARHGAP21Q5T5U3 1957 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 ABCA4P78363 2273 aa4.14□□□□□ -1.75
ATPAF1-203ENST00000460928 STAB1Q9NY15 2570 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 RTTNQ86VV8 2226 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 PHF3Q92576 2039 aaKnown RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 TMEM272A0A1B0GTI8 110 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 FAM240BA0A1B0GVZ2 78 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 A0A1B0GWA3 101 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 A0A1W2PQD3 144 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 FABP12A6NFH5 140 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 CPSF4LA6NMK7 179 aaKnown RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 INMT-MINDY4F8WBC2 141 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 MS4A18H0YCH9 400 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 M0R143 59 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 TNFSF11O14788 317 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 ARPC2O15144 300 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 SPINT2O43291 252 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 PPIHO43447 177 aaKnown RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 CXCL13O43927 109 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 ZG16O60844 167 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 RP2O75695 350 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 TOXO94900 526 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 LYPD3O95274 346 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 IGHG3P01860 377 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 MT-ND4LP03901 98 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 TSPAN19P0C672 248 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 ZNF25P17030 456 aaPredicted RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 GGT1P19440 569 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 FUT1P19526 365 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 PPIBP23284 216 aaKnown RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 EDNRAP25101 427 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 PSMB9P28065 219 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 LCN1P31025 176 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 SRD5A2P31213 254 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 FMO3P31513 532 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 KDELR2P33947 212 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 APOBEC1P41238 236 aaKnown RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 CDX1P47902 265 aaPredicted RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 P2RX1P51575 399 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 CDH11P55287 796 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 DSCR4P56555 118 aaPredicted RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 RGS8P57771 180 aaPredicted RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 LINC00205P59089 165 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 AP3S2P59780 193 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 ISL1P61371 349 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 DEFA5Q01523 94 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 RBPJQ06330 500 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 FABP9Q0Z7S8 132 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 PPP1R8Q12972 351 aaKnown RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 PEA15Q15121 130 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 TRAM1Q15629 374 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 EFNB3Q15768 340 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 TMEM176BQ3YBM2 270 aaPredicted RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 LGALSLQ3ZCW2 172 aaPredicted RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 GLYATQ6IB77 296 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 ACSM5Q6NUN0 579 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 PRSS57Q6UWY2 283 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 LRRN1Q6UXK5 716 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 CHMP1BQ7LBR1 199 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 OAFQ86UD1 273 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 MYPOPQ86VE0 399 aaPredicted RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 RANBP3LQ86VV4 465 aaPredicted RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 WDFY1Q8IWB7 410 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 DND1Q8IYX4 353 aaKnown RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 KDM8Q8N371 416 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 NRACQ8N912 160 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 AQP11Q8NBQ7 271 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 ST6GALNAC3Q8NDV1 305 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 OR51A7Q8NH64 312 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 OR5W2Q8NH69 310 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 ZNF563Q8TA94 476 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 FAM57AQ8TBR7 257 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 CD300LFQ8TDQ1 290 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms