RNA–Protein interactions for RNA: ENST00000454402.6

RFC5-204, Transcript of replication factor C subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC5, Length 1,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-204ENST00000454402 ING3Q9NXR8 418 aa12.95□□□□□ -0.34
RFC5-204ENST00000454402 RPUSD1Q9UJJ7 312 aaKnown RBP12.95□□□□□ -0.34
RFC5-204ENST00000454402 POLR3KQ9Y2Y1 108 aaPredicted RBP12.95□□□□□ -0.34
RFC5-204ENST00000454402 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.94□□□□□ -0.341e-9■■■■■ 37.6
RFC5-204ENST00000454402 PPIAL4CA0A0B4J2A2 164 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 KIR2DS1A0A191URI9 304 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 ALX3O95076 343 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 HTR3BO95264 441 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 HAND1O96004 215 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 PPIAL4GP0DN37 164 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 CPEP16870 476 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 GABRR1P24046 479 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 RIPPLY3P57055 190 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 TPBGQ13641 420 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 EDDM3AQ14507 147 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 METAP1DQ6UB28 335 aaPredicted RBP12.94□□□□□ -0.34
RFC5-204ENST00000454402 PHC2Q8IXK0 858 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 PDZD9Q8IXQ8 264 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 PNLDC1Q8NA58 520 aaKnown RBP12.94□□□□□ -0.34
RFC5-204ENST00000454402 MUL1Q969V5 352 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 SDSLQ96GA7 329 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 POM121Q96HA1 1249 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 YTHDF1Q9BYJ9 559 aaKnown RBP12.94□□□□□ -0.34
RFC5-204ENST00000454402 PPIL3Q9H2H8 161 aaKnown RBP12.94□□□□□ -0.34
RFC5-204ENST00000454402 HMG20AQ9NP66 347 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 LRRC42Q9Y546 428 aa12.94□□□□□ -0.34
RFC5-204ENST00000454402 KDM4BO94953 1096 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 FAM157CP0CG43 387 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 FSTP19883 344 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 SERPINA2P20848 420 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 PTGFRP43088 359 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 DLX1P56177 255 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 EDDM3BP56851 147 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 PAX8Q06710 450 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 NEDD8Q15843 81 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 HSD17B12Q53GQ0 312 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 ZNF561Q8N587 486 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 OCEL1Q9H607 264 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 ISYNA1Q9NPH2 558 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 GLS2Q9UI32 602 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 HSPB6O14558 160 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 ALDOBP05062 364 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 ZNF44P15621 663 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 SRSF2Q01130 221 aaKnown RBP12.93□□□□□ -0.34
RFC5-204ENST00000454402 FABP5Q01469 135 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 GPR50Q13585 617 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 SSX1Q16384 188 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 METTL11BQ5VVY1 283 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 ZNF773Q6PK81 442 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 PRIMA1Q86XR5 153 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 ZSCAN4Q8NAM6 433 aaPredicted RBP12.93□□□□□ -0.34
RFC5-204ENST00000454402 NANPQ8TBE9 248 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 DCTN5Q9BTE1 182 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 CNTD2Q9H8S5 307 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 EXOSC4Q9NPD3 245 aaKnown RBP12.93□□□□□ -0.34
RFC5-204ENST00000454402 FOXJ3Q9UPW0 622 aa12.93□□□□□ -0.34
RFC5-204ENST00000454402 TRAV40A0A0B4J280 105 aa12.92□□□□□ -0.34
RFC5-204ENST00000454402 TOX4O94842 621 aa12.92□□□□□ -0.34
RFC5-204ENST00000454402 ECDO95905 644 aaPredicted RBP12.92□□□□□ -0.34
RFC5-204ENST00000454402 TK1P04183 234 aa12.92□□□□□ -0.34
RFC5-204ENST00000454402 CHRM2P08172 466 aa12.92□□□□□ -0.34
RFC5-204ENST00000454402 GP2P55259 537 aaKnown RBP12.92□□□□□ -0.34
RFC5-204ENST00000454402 PIGYQ3MUY2 71 aa12.92□□□□□ -0.34
RFC5-204ENST00000454402 SLC22A6Q4U2R8 563 aa12.92□□□□□ -0.34
RFC5-204ENST00000454402 UNQ9370/PRO34162Q6UXP9 181 aa12.92□□□□□ -0.34
RFC5-204ENST00000454402 TMEM91Q6ZNR0 172 aa12.92□□□□□ -0.34
RFC5-204ENST00000454402 SAXO1Q8IYX7 474 aa12.92□□□□□ -0.34
RFC5-204ENST00000454402 TPRX1Q8N7U7 411 aa12.92□□□□□ -0.34
RFC5-204ENST00000454402 DACT3Q96B18 629 aaPredicted RBP12.92□□□□□ -0.34
RFC5-204ENST00000454402 METTL9Q9H1A3 318 aa12.92□□□□□ -0.34
RFC5-204ENST00000454402 C19orf12Q9NSK7 152 aa12.92□□□□□ -0.34
RFC5-204ENST00000454402 MRPS28Q9Y2Q9 187 aaKnown RBP12.92□□□□□ -0.34
RFC5-204ENST00000454402 A0A1W2PP11 408 aa12.91□□□□□ -0.34
RFC5-204ENST00000454402 TMEM82A0PJX8 343 aa12.91□□□□□ -0.34
RFC5-204ENST00000454402 SH2D1BO14796 132 aa12.91□□□□□ -0.34
RFC5-204ENST00000454402 OR2H2O95918 312 aa12.91□□□□□ -0.34
RFC5-204ENST00000454402 CSTBP04080 98 aaKnown RBP12.91□□□□□ -0.34
RFC5-204ENST00000454402 IGHV4-38-2P0DP08 117 aa12.91□□□□□ -0.34
RFC5-204ENST00000454402 EPHA1P21709 976 aa12.91□□□□□ -0.34
RFC5-204ENST00000454402 CAV3P56539 151 aa12.91□□□□□ -0.34
RFC5-204ENST00000454402 GRK1Q15835 563 aa12.91□□□□□ -0.34
RFC5-204ENST00000454402 AWAT2Q6E213 333 aa12.91□□□□□ -0.34
RFC5-204ENST00000454402 GLIPR1L1Q6UWM5 242 aa12.91□□□□□ -0.34
RFC5-204ENST00000454402 THRSPQ92748 146 aa12.91□□□□□ -0.34
RFC5-204ENST00000454402 SIRT7Q9NRC8 400 aa12.91□□□□□ -0.34
RFC5-204ENST00000454402 A0A1W2PRD5 423 aa12.9□□□□□ -0.34
RFC5-204ENST00000454402 A0A1W2PRF3 423 aa12.9□□□□□ -0.34
RFC5-204ENST00000454402 A0A1W2PRM7 423 aa12.9□□□□□ -0.34
RFC5-204ENST00000454402 DEGS1O15121 323 aa12.9□□□□□ -0.34
RFC5-204ENST00000454402 MRPS14O60783 128 aaKnown RBP12.9□□□□□ -0.34
RFC5-204ENST00000454402 GPX5O75715 221 aa12.9□□□□□ -0.34
RFC5-204ENST00000454402 LIPFP07098 398 aa12.9□□□□□ -0.34
RFC5-204ENST00000454402 SRMP19623 302 aa12.9□□□□□ -0.34
RFC5-204ENST00000454402 CALRP27797 417 aaKnown RBP12.9□□□□□ -0.34
RFC5-204ENST00000454402 GABRA5P31644 462 aa12.9□□□□□ -0.34
RFC5-204ENST00000454402 RPL31P62899 125 aaKnown RBP12.9□□□□□ -0.34
RFC5-204ENST00000454402 KLF17Q5JT82 389 aaPredicted RBP12.9□□□□□ -0.34
RFC5-204ENST00000454402 SPIN3Q5JUX0 258 aa12.9□□□□□ -0.34
RFC5-204ENST00000454402 BRD3OSQ6XYD6 125 aa12.9□□□□□ -0.34
RFC5-204ENST00000454402 GDPD3Q7L5L3 318 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms