RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 COL10A1Q03692 680 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 SCN1BQ07699 218 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 TIMM50Q3ZCQ8 353 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 DCAF12L2Q5VW00 463 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 FAHD2BQ6P2I3 314 aaPredicted RBP12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 BTNL3Q6UXE8 466 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 LYPD6Q86Y78 171 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 OSR2Q8N2R0 312 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 TMEM185AQ8NFB2 350 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 OR4D6Q8NGJ1 314 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 OR5D13Q8NGL4 314 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 OR10K1Q8NGX5 313 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 RAB40AQ8WXH6 277 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 FAHD2AQ96GK7 314 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 CHCHD6Q9BRQ6 235 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 MAB21L2Q9Y586 359 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 V9GY05 133 aa12.14□□□□□ -0.47
NCKIPSD-207ENST00000453349 A0A0G2JMP0 313 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 A0A0X1KG70 313 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 A0A1B0GW55 424 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 DEGS1O15121 323 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 UBBP0CG47 229 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 DUX4L2P0CJ85 424 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 DUX4L3P0CJ86 424 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 DUX4L4P0CJ87 422 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 DUX4L5P0CJ88 424 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 DUX4L6P0CJ89 424 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 DUX4L7P0CJ90 424 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 SMIM18P0DKX4 95 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 CD37P11049 281 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 GTF2F2P13984 249 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 RAB3BP20337 219 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 SERPINA2P20848 420 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 GADD45AP24522 165 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 HTR2CP28335 458 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 DUSP1P28562 367 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 CAV3P56539 151 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 DGUOKQ16854 277 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 SLC22A6Q4U2R8 563 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 C1orf100Q5SVJ3 147 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 DUX4L9Q6RFH8 374 aaPredicted RBP12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 GDPGP1Q6ZNW5 385 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 BTN2A1Q7KYR7 527 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 TPRA1Q86W33 373 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 ASCC1Q8N9N2 400 aaKnown RBP12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 Q8NFD4 153 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 OR4M2Q8NGB6 313 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 PPP1R35Q8TAP8 253 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 TBC1D15Q8TC07 691 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 H1FXQ92522 213 aaKnown RBP12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 YIPF6Q96EC8 236 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 SNX22Q96L94 193 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 KCTD7Q96MP8 289 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 FAM234AQ9H0X4 552 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 PLGRKTQ9HBL7 147 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 IL36RNQ9UBH0 155 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 DUX4Q9UBX2 424 aa12.13□□□□□ -0.47
NCKIPSD-207ENST00000453349 YLPM1P49750 1951 aaKnown RBP12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 LOC100506127A0A0U1RQW1 187 aa12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 J3QLI3 93 aa12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 TK1P04183 234 aa12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 LIPFP07098 398 aa12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 ZNF44P15621 663 aa12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 CHST4Q8NCG5 386 aa12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 OR51T1Q8NGJ9 327 aa12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 OR6M1Q8NGM8 313 aa12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 MRPS24Q96EL2 167 aaKnown RBP12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 NUDT16L1Q9BRJ7 211 aaKnown RBP12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 MRI1Q9BV20 369 aa12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 MMP26Q9NRE1 261 aa12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 TMEM160Q9NX00 188 aa12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 METRNQ9UJH8 293 aa12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 ST3GAL6Q9Y274 331 aa12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 INSIG2Q9Y5U4 225 aa12.12□□□□□ -0.47
NCKIPSD-207ENST00000453349 MYO9AB2RTY4 2548 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 IGHV2-70DA0A0C4DH43 119 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 KIR2DS1A0A191URI9 304 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 K7N7A8 449 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 SLC17A2O00624 439 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 SLC22A1O15245 554 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 ENSAO43768 121 aaKnown RBP12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 AIREO43918 545 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 OR2H2O95918 312 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 SELLP14151 372 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 GABRR1P24046 479 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 LMO1P25800 156 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 IL13RA2Q14627 380 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 LINC00596Q86U02 117 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 LURAP1LQ8IV03 231 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 GFI1Q99684 422 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 DCTN5Q9BTE1 182 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 CST11Q9H112 138 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 C7orf69Q9H7B7 122 aa12.11□□□□□ -0.47
NCKIPSD-207ENST00000453349 AKAP9Q99996 3911 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 CCDC168Q8NDH2 2452 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 A0A0G2JK05 382 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 SIRPB1O00241 398 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 FCN3O75636 299 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 CRTAPO75718 401 aaPredicted RBP12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 PPIAL4GP0DN37 164 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms