RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 AMBNQ9NP70 447 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 INPP5EQ9NRR6 644 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 RBFOX1Q9NWB1 397 aaKnown RBP12.43□□□□□ -0.42
CHD3-205ENST00000449744 MYRFQ9Y2G1 1151 aa12.43□□□□□ -0.42
CHD3-205ENST00000449744 RPL36Q9Y3U8 105 aaKnown RBP12.43□□□□□ -0.42
CHD3-205ENST00000449744 TMEM82A0PJX8 343 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 MEX3AA1L020 520 aaKnown RBP12.42□□□□□ -0.42
CHD3-205ENST00000449744 OR4C45A6NMZ5 311 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 M0QZ24 198 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 TSPAN9O75954 239 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 PRKACAP17612 351 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 DUSP1P28562 367 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 NPBWR2P48146 333 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 PROK1P58294 105 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 MEF2CQ06413 473 aaPredicted RBP12.42□□□□□ -0.42
CHD3-205ENST00000449744 RAB40BQ12829 278 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 MRPL28Q13084 256 aaKnown RBP12.42□□□□□ -0.42
CHD3-205ENST00000449744 PDZK1IP1Q13113 114 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 GRK1Q15835 563 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 AANATQ16613 207 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 ZNF555Q8NEP9 628 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 OR51A4Q8NGJ6 313 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 OR13C9Q8NGT0 318 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 OR10AC1Q8NH08 325 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 STMN2Q93045 179 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 RFT1Q96AA3 541 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 ZNF714Q96N38 554 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 CHST6Q9GZX3 395 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 COMMD4Q9H0A8 199 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 ISG20L2Q9H9L3 353 aaKnown RBP12.42□□□□□ -0.42
CHD3-205ENST00000449744 SEBOXQ9HB31 216 aaPredicted RBP12.42□□□□□ -0.42
CHD3-205ENST00000449744 RAB18Q9NP72 206 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 FAM118AQ9NWS6 357 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 IL36RNQ9UBH0 155 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 PCDHGB5Q9Y5G0 923 aa12.42□□□□□ -0.42
CHD3-205ENST00000449744 IGHA1P01876 353 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 RBP4P02753 201 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 ARG1P05089 322 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 CCDC159P0C7I6 412 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 CALCBP10092 127 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 GBX2P52951 348 aaPredicted RBP12.41□□□□□ -0.42
CHD3-205ENST00000449744 DLX6P56179 175 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 KRTAP10-3P60369 221 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 ZNF146Q15072 292 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 KLHL22Q53GT1 634 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 SPIN3Q5JUX0 258 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 SLC35E4Q6ICL7 350 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 OR52N4Q8NGI2 321 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 ZCCHC4Q9H5U6 513 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 TCF7L1Q9HCS4 588 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 ERVK13-1Q9NX77 482 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 GSTK1Q9Y2Q3 226 aa12.41□□□□□ -0.42
CHD3-205ENST00000449744 TBL2Q9Y4P3 447 aaKnown RBP12.41□□□□□ -0.42
CHD3-205ENST00000449744 TMEM212A6NML5 194 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 SH2D1BO14796 132 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 MGST3O14880 152 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 KCNAB3O43448 404 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 MT-ND2P03891 347 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 HCKP08631 526 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 IGHV1-8P0DP01 117 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 PAX6P26367 422 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 GABRA5P31644 462 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 DYNC1I2Q13409 638 aaKnown RBP12.4□□□□□ -0.42
CHD3-205ENST00000449744 LHFPL4Q7Z7J7 247 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 TRAPPC6BQ86SZ2 158 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 SERPINA12Q8IW75 414 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 TPRX1Q8N7U7 411 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 OR52I1Q8NGK6 324 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 OR5D18Q8NGL1 313 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 OR5D14Q8NGL3 314 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 OR5AK2Q8NH90 309 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 HAVCR2Q8TDQ0 301 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 TSEN15Q8WW01 171 aaKnown RBP12.4□□□□□ -0.42
CHD3-205ENST00000449744 FOXRED1Q96CU9 486 aaPredicted RBP12.4□□□□□ -0.42
CHD3-205ENST00000449744 AJUBAQ96IF1 538 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 SPACA5Q96QH8 159 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 HMG20AQ9NP66 347 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 EXOSC4Q9NPD3 245 aaKnown RBP12.4□□□□□ -0.42
CHD3-205ENST00000449744 ABCB10Q9NRK6 738 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 SMPD3Q9NY59 655 aaPredicted RBP12.4□□□□□ -0.42
CHD3-205ENST00000449744 DHDHQ9UQ10 334 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 LINC00312Q9Y6C7 94 aa12.4□□□□□ -0.42
CHD3-205ENST00000449744 SIRPB1O00241 398 aa12.39□□□□□ -0.43
CHD3-205ENST00000449744 PSPNO60542 156 aa12.39□□□□□ -0.43
CHD3-205ENST00000449744 KDM4BO94953 1096 aa12.39□□□□□ -0.43
CHD3-205ENST00000449744 ZFPL1O95159 310 aa12.39□□□□□ -0.43
CHD3-205ENST00000449744 ZSCAN26Q16670 478 aa12.39□□□□□ -0.43
CHD3-205ENST00000449744 PLA1AQ53H76 456 aa12.39□□□□□ -0.43
CHD3-205ENST00000449744 LIAT1Q6ZQX7 453 aa12.39□□□□□ -0.43
CHD3-205ENST00000449744 DTX3Q8N9I9 347 aa12.39□□□□□ -0.43
CHD3-205ENST00000449744 OR4S1Q8NGB4 309 aa12.39□□□□□ -0.43
CHD3-205ENST00000449744 OR11H6Q8NGC7 330 aa12.39□□□□□ -0.43
CHD3-205ENST00000449744 OR4C13Q8NGP0 309 aa12.39□□□□□ -0.43
CHD3-205ENST00000449744 RDH12Q96NR8 316 aa12.39□□□□□ -0.43
CHD3-205ENST00000449744 RHOFQ9HBH0 211 aa12.39□□□□□ -0.43
CHD3-205ENST00000449744 MRPS18AQ9NVS2 196 aaKnown RBP12.39□□□□□ -0.43
CHD3-205ENST00000449744 FBLN5Q9UBX5 448 aa12.39□□□□□ -0.43
CHD3-205ENST00000449744 IGKV1-12A0A0C4DH73 117 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 FUOMA2VDF0 154 aa12.38□□□□□ -0.43
CHD3-205ENST00000449744 FAM90A8PA6NJQ4 464 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms