RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ERBINQ96RT1 1412 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 TIMM17AQ99595 171 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 TMEM243Q9BU79 118 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 SFXN3Q9BWM7 321 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 SAMD10Q9BYL1 202 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 LHX5Q9H2C1 402 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 CDC42EP4Q9H3Q1 356 aaKnown RBP3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 IL20Q9NYY1 176 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 ZNF225Q9UK10 706 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 RAB22AQ9UL26 194 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 TP53TG5Q9Y2B4 290 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 NALCNQ8IZF0 1738 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 PLCH1Q4KWH8 1693 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 PHRF1Q9P1Y6 1649 aaKnown RBP3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 ARHGEF5Q12774 1597 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 TULP4Q9NRJ4 1543 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 C10orf71Q711Q0 1435 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 SSH2Q76I76 1423 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 NDUFS5O43920 106 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 RP2O75695 350 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 ATP6V1G2O95670 118 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 LY6G6DO95868 133 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 HLA-AP01891 365 aaKnown RBP3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 IGHV4-34P06331 123 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 HOXA6P31267 233 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 APLNRP35414 380 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 TTPAP49638 278 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 ARG2P78540 354 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 CYP24A1Q07973 514 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 DAZ2Q13117 558 aaKnown RBP3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 ERCC8Q13216 396 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 IL17AQ16552 155 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 C6orf99Q4VX62 202 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 UGT2A3Q6UWM9 527 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 C6orf120Q7Z4R8 191 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 C10orf107Q8IVU9 208 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 C2orf73Q8N5S3 287 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 RDH5Q92781 318 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 TMEM159Q96B96 161 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 KCNS1Q96KK3 526 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 TMEM56Q96MV1 263 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 RILPQ96NA2 401 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 OR2M4Q96R27 311 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 METTL26Q96S19 204 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 CCDC94Q9BW85 323 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 DHX35Q9H5Z1 703 aaKnown RBP3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 EXOSC4Q9NPD3 245 aaKnown RBP3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 DAZ3Q9NR90 486 aaKnown RBP3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 RBM22Q9NW64 420 aaKnown RBP eCLIP3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 C2orf16Q68DN1 1984 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 NRAPQ86VF7 1730 aa3.05□□□□□ -1.92
HMGB1P48-201ENST00000446155 CDC42BPGQ6DT37 1551 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 EEA1Q15075 1411 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 SCN2AQ99250 2005 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 IGKV1-27A0A075B6S5 117 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 INS-IGF2F8WCM5 200 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 LAD1O00515 517 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 TAAR5O14804 337 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 SYNGR1O43759 233 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 HPGDSO60760 199 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 SS18L1O75177 396 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 BCHEP06276 602 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 COX5BP10606 129 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 HIST1H1CP16403 213 aaKnown RBP3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 DRD3P35462 400 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 POLR2IP36954 125 aaKnown RBP3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 UBE2AP49459 152 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 PSMB2P49721 201 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 ZNF136P52737 540 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 CRISP3P54108 245 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 GFERP55789 205 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 DLX6P56179 175 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 BAXQ07812 192 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 FADDQ13158 208 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 NAB1Q13506 487 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 GNA13Q14344 377 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 IRF4Q15306 451 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 ZCCHC24Q8N2G6 241 aaKnown RBP3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 BLNKQ8WV28 456 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 FAM104AQ969W3 186 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 TM4SF18Q96CE8 201 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 DDIT4LQ96D03 193 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 CHMP6Q96FZ7 201 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 BIRC8Q96P09 236 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 TAAR1Q96RJ0 339 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 GPR22Q99680 433 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 HSD17B10Q99714 261 aaKnown RBP3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 HDHD3Q9BSH5 251 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 CHAC1Q9BUX1 264 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 DIABLOQ9NR28 239 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 TAS2R13Q9NYV9 303 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 NRXN3Q9Y4C0 1643 aa3.04□□□□□ -1.92
HMGB1P48-201ENST00000446155 PXDNLA1KZ92 1463 aa3.03□□□□□ -1.92
HMGB1P48-201ENST00000446155 ATP7BP35670 1465 aa3.03□□□□□ -1.92
HMGB1P48-201ENST00000446155 TMEM131Q92545 1883 aa3.03□□□□□ -1.92
HMGB1P48-201ENST00000446155 RANBP2P49792 3224 aaKnown RBP3.03□□□□□ -1.92
HMGB1P48-201ENST00000446155 RGPD3A6NKT7 1758 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P48-201ENST00000446155 COL14A1Q05707 1796 aaKnown RBP3.03□□□□□ -1.92
HMGB1P48-201ENST00000446155 RGPD4Q7Z3J3 1758 aa3.03□□□□□ -1.92
HMGB1P48-201ENST00000446155 ARHGEF28Q8N1W1 1705 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms