RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 IGHV4-59P01825 116 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 MT-ND2P03891 347 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 RPSAP08865 295 aaKnown RBP11.24□□□□□ -0.61
LTBR-202ENST00000440421 SAA4P35542 130 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 ERVFRD-1P60508 538 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 FOXL1Q12952 345 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 EDDM3AQ14507 147 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 CDK5R1Q15078 307 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 CCDC58Q4VC31 144 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 RPL22L1Q6P5R6 122 aaKnown RBP11.24□□□□□ -0.61
LTBR-202ENST00000440421 GDPD3Q7L5L3 318 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 PARP16Q8N5Y8 322 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 OR5D13Q8NGL4 314 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 SSMEM1Q8WWF3 244 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 CHST6Q9GZX3 395 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 CHCHD3Q9NX63 227 aaKnown RBP11.24□□□□□ -0.61
LTBR-202ENST00000440421 BABAM2Q9NXR7 383 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 SIRT4Q9Y6E7 314 aaPredicted RBP11.24□□□□□ -0.61
LTBR-202ENST00000440421 HSPE1-MOB4S4R3N1 261 aa11.24□□□□□ -0.61
LTBR-202ENST00000440421 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 XPNPEP2O43895 674 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 LALBAP00709 142 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 FBP1P09467 338 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 TMEM225BP0DP42 221 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 OMGP23515 440 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 GABRR1P24046 479 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 UBE2E1P51965 193 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 SLC34A1Q06495 639 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 GABPB1Q06547 395 aaPredicted RBP11.23□□□□□ -0.61
LTBR-202ENST00000440421 ST3GAL4Q11206 333 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 MED21Q13503 144 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 KISS1Q15726 138 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 LAIR2Q6ISS4 152 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 HCP5Q6MZN7 132 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 CRIP3Q6Q6R5 217 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 OR8H2Q8N162 312 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 ZFP41Q8N8Y5 198 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 OR52N4Q8NGI2 321 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 TBC1D15Q8TC07 691 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 GPR148Q8TDV2 347 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 SNX22Q96L94 193 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 UNKLQ9H9P5 680 aaKnown RBP11.23□□□□□ -0.61
LTBR-202ENST00000440421 HMG20AQ9NP66 347 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 TAS2R4Q9NYW5 299 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 GSTK1Q9Y2Q3 226 aa11.23□□□□□ -0.61
LTBR-202ENST00000440421 hCG_1809904A0A1W2PP81 198 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 A0A1W2PPE2 198 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 A0A1W2PR64 198 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 A0A1W2PRV1 198 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 EFCAB10A6NFE3 127 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 SIRPB1O00241 398 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 OGG1O15527 345 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 KDM4BO94953 1096 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 PAHP00439 452 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 CRYBA1P05813 215 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 RAB3AP20336 220 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 COX7A1P24310 79 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 IER3P46695 156 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 SCN1BQ07699 218 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 GRK1Q15835 563 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 ASPHD2Q6ICH7 369 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 ZNF782Q6ZMW2 699 aaPredicted RBP11.22□□□□□ -0.61
LTBR-202ENST00000440421 C17orf107Q6ZR85 190 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 AHSA2Q719I0 299 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 SATL1Q86VE3 508 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 LDLRAD3Q86YD5 345 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 C11orf42Q8N5U0 333 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 TMEM86BQ8N661 226 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 TPRX1Q8N7U7 411 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 BPIFB6Q8NFQ5 453 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 OR4S1Q8NGB4 309 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 OR51A2Q8NGJ7 313 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 OR13C5Q8NGS8 318 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 OR52N1Q8NH53 320 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 RPS4Y2Q8TD47 263 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 NRG4Q8WWG1 115 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 NKX3-1Q99801 234 aaPredicted RBP11.22□□□□□ -0.61
LTBR-202ENST00000440421 GLS2Q9UI32 602 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 PSORS1C1Q9UIG5 152 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 SF3B6Q9Y3B4 125 aaKnown RBP11.22□□□□□ -0.61
LTBR-202ENST00000440421 POMT1Q9Y6A1 747 aa11.22□□□□□ -0.61
LTBR-202ENST00000440421 SH2D1BO14796 132 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 MAGEB3O15480 346 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 PSPNO60542 156 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 ALX3O95076 343 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 OR2H2O95918 312 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 CD2P06729 351 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 MDKP21741 143 aaPredicted RBP11.21□□□□□ -0.61
LTBR-202ENST00000440421 DLX6P56179 175 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 ZP1P60852 638 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 ZNF146Q15072 292 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 SPIN3Q5JUX0 258 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 SAXO1Q8IYX7 474 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 STX19Q8N4C7 294 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 ZSCAN4Q8NAM6 433 aaPredicted RBP11.21□□□□□ -0.61
LTBR-202ENST00000440421 FBLIM1Q8WUP2 373 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 C17orf50Q8WW18 174 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 TFAP2CQ92754 450 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 GHSRQ92847 366 aa11.21□□□□□ -0.61
LTBR-202ENST00000440421 TMEM106AQ96A25 262 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms