RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 S100A5P33763 92 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 OR10K2Q6IF99 312 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 PRSS57Q6UWY2 283 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 DCDC5Q6ZRR9 648 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 DNM1P46Q6ZS02 220 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 TGIF2LYQ8IUE0 185 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 OR5H6Q8NGV6 325 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 ANGPTL6Q8NI99 470 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 S100A16Q96FQ6 103 aaKnown RBP10.63□□□□□ -0.71
SCLT1-202ENST00000439369 WDFY2Q96P53 400 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 GAL3ST1Q99999 423 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 WDR13Q9H1Z4 485 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 BANF2Q9H503 90 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 DIABLOQ9NR28 239 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 DCAF16Q9NXF7 216 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 TREM2Q9NZC2 230 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 RABL2AQ9UBK7 228 aaPredicted RBP10.63□□□□□ -0.71
SCLT1-202ENST00000439369 KAAG1Q9UBP8 84 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 ZNF222Q9UK12 451 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 RABL2BQ9UNT1 228 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 CACNA1DQ01668 2161 aa10.63□□□□□ -0.71
SCLT1-202ENST00000439369 UTP20O75691 2785 aaKnown RBP10.63□□□□□ -0.71
SCLT1-202ENST00000439369 IGKV1D-17A0A075B6S4 117 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 A0A1W2PP11 408 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 NKX6-3A6NJ46 265 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 LYNX1G3V0Z9 82 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 RGS5O15539 181 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 PPIHO43447 177 aaKnown RBP10.62□□□□□ -0.71
SCLT1-202ENST00000439369 SSX4O60224 188 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 HPGDSO60760 199 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 LY6HO94772 140 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 HAND1O96004 215 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 LYNX1P0DP58 116 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 PSG2P11465 335 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 PRDX2P32119 198 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 GPR6P46095 362 aaPredicted RBP10.62□□□□□ -0.71
SCLT1-202ENST00000439369 PITPNBP48739 271 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 EFNB2P52799 333 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 ZMYND11Q15326 602 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 PIGYQ3MUY2 71 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 BAIAP2L2Q6UXY1 529 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 CMTM4Q8IZR5 234 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 SPICQ8N5J4 248 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 ZNF525Q8N782 197 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 BOLLQ8N9W6 283 aaKnown RBP10.62□□□□□ -0.71
SCLT1-202ENST00000439369 C10orf105Q8TEF2 133 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 FAM168AQ92567 244 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 PHF21AQ96BD5 680 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 PERPQ96FX8 193 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 SDSLQ96GA7 329 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 MED30Q96HR3 178 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 PIMREGQ9BSJ6 248 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 C6orf62Q9GZU0 229 aaPredicted RBP10.62□□□□□ -0.71
SCLT1-202ENST00000439369 ATG5Q9H1Y0 275 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 KCNK15Q9H427 330 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 TMEM165Q9HC07 324 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 RCC2Q9P258 522 aaKnown RBP10.62□□□□□ -0.71
SCLT1-202ENST00000439369 HSF4Q9ULV5 492 aa10.62□□□□□ -0.71
SCLT1-202ENST00000439369 CHD3Q12873 2000 aaKnown RBP10.62□□□□□ -0.71
SCLT1-202ENST00000439369 RFPL4AA6NLU0 287 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 FOXI3A8MTJ6 420 aaPredicted RBP10.61□□□□□ -0.71
SCLT1-202ENST00000439369 C3orf80F5H4A9 247 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 RFPL4AL1F8VTS6 287 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 CTDSP2O14595 271 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 TNFRSF13BO14836 293 aaPredicted RBP10.61□□□□□ -0.71
SCLT1-202ENST00000439369 GEMIN2O14893 280 aaKnown RBP10.61□□□□□ -0.71
SCLT1-202ENST00000439369 DEGS1O15121 323 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 PDCD6O75340 191 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 FUT3P21217 361 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 TALDO1P37837 337 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 MNDAP41218 407 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 KCNJ3P48549 501 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 IKZF1Q13422 519 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 TAF9Q16594 264 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 SHEQ5VZ18 495 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 Q6P435 159 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 ZNF788Q6ZQV5 615 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 SLC36A1Q7Z2H8 476 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 ZNF561Q8N587 486 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 OR10R2Q8NGX6 335 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 PPP1R35Q8TAP8 253 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 C15orf40Q8WUR7 153 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 NEDD4LQ96PU5 975 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 FAM234AQ9H0X4 552 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 MIXL1Q9H2W2 232 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 ZNF665Q9H7R5 613 aa10.61□□□□□ -0.71
SCLT1-202ENST00000439369 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.61□□□□□ -0.712e-6■■■■□ 19.6
SCLT1-202ENST00000439369 POM121CA8CG34 1229 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 VWC2LB2RUY7 222 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 RAB27BO00194 218 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 SIGLEC5O15389 551 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 XRCC3O43542 346 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 CA11O75493 328 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 OR7C1O76099 320 aaPredicted RBP10.6□□□□□ -0.71
SCLT1-202ENST00000439369 EIF4EP06730 217 aaKnown RBP10.6□□□□□ -0.71
SCLT1-202ENST00000439369 SLC25A16P16260 332 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 ELK1P19419 428 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 PTBP1P26599 531 aaKnown RBP eCLIP10.6□□□□□ -0.712e-8■■■■■ 40.2
SCLT1-202ENST00000439369 CHATP28329 748 aa10.6□□□□□ -0.71
SCLT1-202ENST00000439369 NR4A2P43354 598 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms