RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 DMBX1Q8NFW5 382 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF501Q96CX3 271 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-205ENST00000438362 AQP10Q96PS8 301 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 GDF15Q99988 308 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 SMIM7Q9BQ49 75 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 GCM1Q9NP62 436 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 RAB9BQ9NP90 201 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 LIN7CQ9NUP9 197 aaKnown RBP5.88□□□□□ -1.47
CSDE1-205ENST00000438362 B3GAT1Q9P2W7 334 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 SDK2Q58EX2 2172 aa5.88□□□□□ -1.47
CSDE1-205ENST00000438362 FREM3P0C091 2139 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 CCDC187A0A096LP49 1063 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 TRAV14DV4A0A0A6YYC5 116 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 TRAV20A0A0B4J274 112 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 GEMIN2O14893 280 aaKnown RBP5.87□□□□□ -1.47
CSDE1-205ENST00000438362 GRPP07492 148 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 P2RY4P51582 365 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 GPM6AP51674 278 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 RAC3P60763 192 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 MZT1Q08AG7 82 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 OR2T2Q6IF00 324 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 WNT2BQ93097 391 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 APOBEC3DQ96AK3 386 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-205ENST00000438362 NUDT16L1Q9BRJ7 211 aaKnown RBP5.87□□□□□ -1.47
CSDE1-205ENST00000438362 HDHD3Q9BSH5 251 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-205ENST00000438362 ARV1Q9H2C2 271 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 C5orf66Q9H5L9 145 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 C12orf49Q9H741 205 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 MDC1Q14676 2089 aaKnown RBP5.87□□□□□ -1.47
CSDE1-205ENST00000438362 hCG_1809904A0A1W2PP81 198 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 A0A1W2PR64 198 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 A0A1W2PRV1 198 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 VSTM5A8MXK1 200 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 AP4M1O00189 453 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 SIRPB1O00241 398 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 GPR37O15354 613 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 IGHMP01871 453 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 SMIM6P0DI80 62 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 EDN3P14138 238 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 CALCRP30988 508 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 GABRA2P47869 451 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 H3F3AP84243 136 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 FAM3AP98173 230 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 IL11RAQ14626 422 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 TBC1D28Q2M2D7 210 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 ANKRD55Q3KP44 614 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 TMEM41BQ5BJD5 291 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 PABPC1L2AQ5JQF8 200 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 ATRAIDQ6UW56 229 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 RPUSD4Q96CM3 377 aaKnown RBP5.87□□□□□ -1.47
CSDE1-205ENST00000438362 OR10C1Q96KK4 312 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 LHFPL6Q9Y693 200 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 TCF20Q9UGU0 1960 aaKnown RBP5.87□□□□□ -1.47
CSDE1-205ENST00000438362 A0A0U1RQV5 110 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 RBFOX3A6NFN3 312 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 NPIPB13A6NJU9 1138 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 NPIPB4C9JG80 1138 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 TERTO14746 1132 aaKnown RBP5.87□□□□□ -1.47
CSDE1-205ENST00000438362 PPYP01298 95 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 PNLIPP16233 465 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 RAB5AP20339 215 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 HTD2P86397 168 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 FNDC1Q4ZHG4 1894 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-205ENST00000438362 C6orf15Q6UXA7 325 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-205ENST00000438362 H2BFWTQ7Z2G1 175 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 LINC00518Q8N0U6 118 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 OR2I1PQ8NGU4 316 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 VOPP1Q96AW1 172 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 UCN2Q96RP3 112 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 TIMP4Q99727 224 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF251Q9BRH9 671 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 HEYLQ9NQ87 328 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-205ENST00000438362 STARD10Q9Y365 291 aa5.87□□□□□ -1.47
CSDE1-205ENST00000438362 MDFIC2A0A1B0GVS7 189 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 RNF222A6NCQ9 220 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 KLRC4-KLRK1H3BQV0 150 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 MPPED1O15442 326 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 CDS2O95674 445 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 MELTFP08582 738 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 PGA4P0DJD7 388 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 SRD5A2P31213 254 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 SULT1A1P50225 295 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 UNC119Q13432 240 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 OR2A2Q6IF42 318 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 SLC25A47Q6Q0C1 308 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 OR10P1Q8NGE3 313 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 RAB40CQ96S21 281 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 RSRP1Q9BUV0 290 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 TGIF2Q9GZN2 237 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 UFSP2Q9NUQ7 469 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 IGHV3-64DA0A0J9YX35 117 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 CLEC18AA5D8T8 446 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 CDRT15L2A8MXV6 281 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 SH2D1BO14796 132 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 TIMM8AO60220 97 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-205ENST00000438362 SCGB1D1O95968 90 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 IL2RAP01589 272 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 PRF1P14222 555 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 VDAC1P21796 283 aa5.86□□□□□ -1.47
CSDE1-205ENST00000438362 EPHA8P29322 1005 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms