RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 NPPBP16860 134 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 NPBWR2P48146 333 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 LRRC10Q5BKY1 277 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 TUSC5Q8IXB3 177 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 SPPL3Q8TCT6 385 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 ELF5Q9UKW6 265 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-209ENST00000437951 ANKRD31Q8N7Z5 1873 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 YLPM1P49750 1951 aaKnown RBP10.33□□□□□ -0.76
PTCH1-209ENST00000437951 H0YIG0 161 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 LIPFP07098 398 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 KIR2DL1P43626 348 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-209ENST00000437951 KIR2DL2P43627 348 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-209ENST00000437951 TCL1AP56279 114 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 WNT3P56703 355 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 CDKN3Q16667 212 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 HSF5Q4G112 596 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-209ENST00000437951 LRP10Q7Z4F1 713 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 RDH5Q92781 318 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 C10orf35Q96D05 121 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 SPANXA1Q9NS26 97 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 RGPD2P0DJD1 1756 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 A0A0B4J293 547 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 UBE2L3P68036 154 aaKnown RBP10.33□□□□□ -0.76
PTCH1-209ENST00000437951 CIRBPQ14011 172 aaKnown RBP10.33□□□□□ -0.76
PTCH1-209ENST00000437951 TBC1D26Q86UD7 250 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 OR1P1Q8NH06 330 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 MSL2Q9HCI7 577 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 ICAM5Q9UMF0 924 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 KLK8O60259 260 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 SPINK4O60575 86 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 SRSF10O75494 262 aaKnown RBP10.33□□□□□ -0.76
PTCH1-209ENST00000437951 RBP4P02753 201 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 NKAIN2Q5VXU1 208 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 CD300LDQ6UXZ3 194 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 DDX60Q8IY21 1712 aaKnown RBP10.33□□□□□ -0.76
PTCH1-209ENST00000437951 A0A1B0GV90 55 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 CD38P28907 300 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 SLC25A42Q86VD7 318 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 NOXO1Q8NFA2 376 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 VSTM2AQ8TAG5 236 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 OR6C1Q96RD1 312 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 PRR14Q9BWN1 585 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 VN1R1Q9GZP7 353 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 PDLIM7Q9NR12 457 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 COL8A1P27658 744 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 PTGER1P34995 402 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 NMUP48645 174 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 DEFB133Q30KQ1 61 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 TMEM215Q68D42 235 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 NEU3Q9UQ49 428 aa10.33□□□□□ -0.76
PTCH1-209ENST00000437951 MAST2Q6P0Q8 1798 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 LOC107984156A0A0G2JMH3 177 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 ZBTB42B2RXF5 422 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 CYBAP13498 195 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 CCL11P51671 97 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 SLC25A26Q70HW3 274 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 ARL17AQ8IVW1 177 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 METTL1Q9UBP6 276 aaKnown RBP10.32□□□□□ -0.76
PTCH1-209ENST00000437951 CHD5Q8TDI0 1954 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 HOXB1P14653 301 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-209ENST00000437951 MMP9P14780 707 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 TCTN3Q6NUS6 607 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 SHISA6Q6ZSJ9 500 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-209ENST00000437951 CTXND1A0A1B0GTU2 59 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 H3BP45 60 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 FOLR2P14207 255 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 SMAD2Q15796 467 aaKnown RBP10.32□□□□□ -0.76
PTCH1-209ENST00000437951 FNDC7Q5VTL7 733 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 TGIF2LXQ8IUE1 241 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 RAB33BQ9H082 229 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 OR5AC2Q9NZP5 309 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 B4E171 279 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 ADAP1O75689 374 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 MMP16P51512 607 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 PTOV1Q86YD1 416 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 OR10V1Q8NGI7 309 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 CACNG5Q9UF02 275 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 ZDBF2Q9HCK1 2354 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 TMEM210A6NLX4 147 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 ZNF749O43361 778 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 SMIM13P0DJ93 91 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 ERV3-1Q14264 604 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 MORN1Q5T089 497 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 RBPMS2Q6ZRY4 209 aaKnown RBP10.32□□□□□ -0.76
PTCH1-209ENST00000437951 H3BNC9 293 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 ALOX12BO75342 701 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 PPICP45877 212 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 OR2I1PQ8NGU4 316 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 FBXO4Q9UKT5 387 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 CACNA1DQ01668 2161 aa10.32□□□□□ -0.76
PTCH1-209ENST00000437951 GLI4P10075 376 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 CEBPBP17676 345 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 TWIST1Q15672 202 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 C16orf82Q7Z2V1 217 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 BHLHE23Q8NDY6 225 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 A4GNTQ9UNA3 340 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 DHRS3O75911 302 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 SERF2P84101 59 aa10.31□□□□□ -0.76
PTCH1-209ENST00000437951 TMEM40Q8WWA1 233 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms