RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 PRRG4Q9BZD6 226 aa9.01□□□□□ -0.97
CD44-210ENST00000434472 ZNF442Q9H7R0 627 aa9.01□□□□□ -0.97
CD44-210ENST00000434472 SLC7A10Q9NS82 523 aa9.01□□□□□ -0.97
CD44-210ENST00000434472 CARHSP1Q9Y2V2 147 aaKnown RBP9.01□□□□□ -0.97
CD44-210ENST00000434472 LSM5Q9Y4Y9 91 aaKnown RBP9.01□□□□□ -0.97
CD44-210ENST00000434472 POMT1Q9Y6A1 747 aa9.01□□□□□ -0.97
CD44-210ENST00000434472 COL27A1Q8IZC6 1860 aaPredicted RBP9□□□□□ -0.97
CD44-210ENST00000434472 BORCS7-ASMTA0A0B4J1R7 106 aa9□□□□□ -0.97
CD44-210ENST00000434472 PQLC2LA1A4F0 135 aa9□□□□□ -0.97
CD44-210ENST00000434472 C9orf172C9J069 976 aa9□□□□□ -0.97
CD44-210ENST00000434472 GPR137BO60478 399 aa9□□□□□ -0.97
CD44-210ENST00000434472 NEURL1O76050 574 aa9□□□□□ -0.97
CD44-210ENST00000434472 DIRAS3O95661 229 aa9□□□□□ -0.97
CD44-210ENST00000434472 DUSP1P28562 367 aa9□□□□□ -0.97
CD44-210ENST00000434472 CLDN18P56856 261 aa9□□□□□ -0.97
CD44-210ENST00000434472 FXYD4P59646 89 aa9□□□□□ -0.97
CD44-210ENST00000434472 PRDX4Q13162 271 aa9□□□□□ -0.97
CD44-210ENST00000434472 IL13RA2Q14627 380 aa9□□□□□ -0.97
CD44-210ENST00000434472 RNPS1Q15287 305 aaKnown RBP9□□□□□ -0.97
CD44-210ENST00000434472 MST1LQ2TV78 715 aa9□□□□□ -0.97
CD44-210ENST00000434472 TMEM268Q5VZI3 342 aa9□□□□□ -0.97
CD44-210ENST00000434472 RPL7L1Q6DKI1 246 aaKnown RBP9□□□□□ -0.97
CD44-210ENST00000434472 SPINK14Q6IE38 97 aa9□□□□□ -0.97
CD44-210ENST00000434472 ATRAIDQ6UW56 229 aa9□□□□□ -0.97
CD44-210ENST00000434472 SLC25A26Q70HW3 274 aa9□□□□□ -0.97
CD44-210ENST00000434472 MRPL21Q7Z2W9 205 aaKnown RBP9□□□□□ -0.97
CD44-210ENST00000434472 FOXRED2Q8IWF2 684 aa9□□□□□ -0.97
CD44-210ENST00000434472 ZNF611Q8N823 705 aa9□□□□□ -0.97
CD44-210ENST00000434472 CPEB3Q8NE35 698 aaKnown RBP9□□□□□ -0.97
CD44-210ENST00000434472 LOXL4Q96JB6 756 aa9□□□□□ -0.97
CD44-210ENST00000434472 HIST1H2AAQ96QV6 131 aa9□□□□□ -0.97
CD44-210ENST00000434472 MICU1Q9BPX6 476 aa9□□□□□ -0.97
CD44-210ENST00000434472 SMOC1Q9H4F8 434 aa9□□□□□ -0.97
CD44-210ENST00000434472 TREM1Q9NP99 234 aa9□□□□□ -0.97
CD44-210ENST00000434472 PARP11Q9NR21 331 aa9□□□□□ -0.97
CD44-210ENST00000434472 TMED3Q9Y3Q3 217 aa9□□□□□ -0.97
CD44-210ENST00000434472 F8W036 122 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 TRIM77I1YAP6 450 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 TOR1AO14656 332 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 ABCD4O14678 606 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 LRP3O75074 770 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 OR7C1O76099 320 aaPredicted RBP8.99□□□□□ -0.97
CD44-210ENST00000434472 CTXN2P0C2S0 81 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 OR5AC1P0C628 307 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 P2RY1P47900 373 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 FGF12P61328 243 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 PLGLB1Q02325 96 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 PLP2Q04941 152 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 ZNF169Q14929 603 aaPredicted RBP8.99□□□□□ -0.97
CD44-210ENST00000434472 OR1C1Q15619 314 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 MPV17LQ2QL34 196 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 CEACAM21Q3KPI0 293 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 CDCP2Q5VXM1 449 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 LINC00596Q86U02 117 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 MCEMP1Q8IX19 187 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 ZDHHC23Q8IYP9 409 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 UBAC2Q8NBM4 344 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 CLRN3Q8NCR9 226 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 OR56B2PQ8NGI1 322 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 EXTL1Q92935 676 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 APH1AQ96BI3 265 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 MARS2Q96GW9 593 aaKnown RBP8.99□□□□□ -0.97
CD44-210ENST00000434472 PAPOLGQ9BWT3 736 aaKnown RBP8.99□□□□□ -0.97
CD44-210ENST00000434472 SEC11CQ9BY50 192 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 ARRDC1-AS1Q9H2J1 176 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 LIME1Q9H400 295 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 PLK3Q9H4B4 646 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 SLC2A9Q9NRM0 540 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 FBXL17Q9UF56 701 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 PURGQ9UJV8 347 aaKnown RBP8.99□□□□□ -0.97
CD44-210ENST00000434472 KLF13Q9Y2Y9 288 aaPredicted RBP8.99□□□□□ -0.97
CD44-210ENST00000434472 DNAH14Q0VDD8 3507 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 MED12Q93074 2177 aa8.99□□□□□ -0.97
CD44-210ENST00000434472 TRAPPC2LH3BP13 241 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 MED6O75586 246 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 SNAPINO95295 136 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 SCGB1D2O95969 90 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 ACTL6AO96019 429 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 AADACP22760 399 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 ITGA3P26006 1051 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 CAV2P51636 162 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 RND3P61587 244 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 SRYQ05066 204 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 LPAL2Q16609 132 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 SWI5Q1ZZU3 235 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 DCAF10Q5QP82 559 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 CALHM1Q8IU99 346 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 TUSC5Q8IXB3 177 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 COMMD1Q8N668 190 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 BOLLQ8N9W6 283 aaKnown RBP8.98□□□□□ -0.97
CD44-210ENST00000434472 OR5A2Q8NGI9 324 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 SIGLEC12Q96PQ1 595 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 SPIN2AQ99865 258 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 SPIN2BQ9BPZ2 258 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 AIFM2Q9BRQ8 373 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 TTTY12Q9BZ98 90 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 ARV1Q9H2C2 271 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 RIMS4Q9H426 269 aaPredicted RBP8.98□□□□□ -0.97
CD44-210ENST00000434472 CALHM2Q9HA72 323 aa8.98□□□□□ -0.97
CD44-210ENST00000434472 FAM212BQ9NTI7 297 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms