RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 NKAIN3Q8N8D7 197 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 ZSCAN4Q8NAM6 433 aaPredicted RBP12.88□□□□□ -0.35
TREX1-201ENST00000433541 OR10K1Q8NGX5 313 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 METTL9Q9H1A3 318 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 VCX3AQ9NNX9 186 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 EXOSC4Q9NPD3 245 aaKnown RBP12.88□□□□□ -0.35
TREX1-201ENST00000433541 ONECUT1Q9UBC0 465 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 IL36RNQ9UBH0 155 aa12.88□□□□□ -0.35
TREX1-201ENST00000433541 POLR3KQ9Y2Y1 108 aaPredicted RBP12.88□□□□□ -0.35
TREX1-201ENST00000433541 IGKV1-12A0A0C4DH73 117 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 GPR37O15354 613 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 ARL6IP5O75915 188 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 KDM4BO94953 1096 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 CDRT1O95170 752 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 IGKV1D-12P01611 117 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 ZNF44P15621 663 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 AMY2BP19961 511 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 SERPINA2P20848 420 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 PTGFRP43088 359 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 ZP1P60852 638 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 SPIN3Q5JUX0 258 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 METTL11BQ5VVY1 283 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 AWAT2Q6E213 333 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 GDPD3Q7L5L3 318 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 FAM185AQ8N0U4 392 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 NANPQ8TBE9 248 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 MUL1Q969V5 352 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 SDSLQ96GA7 329 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 PCGF1Q9BSM1 259 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 TMPRSS13Q9BYE2 586 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 HMG20AQ9NP66 347 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 ZNF222Q9UK12 451 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 MRPS28Q9Y2Q9 187 aaKnown RBP12.87□□□□□ -0.35
TREX1-201ENST00000433541 C2CD3Q4AC94 2353 aa12.87□□□□□ -0.35
TREX1-201ENST00000433541 MEGF11A6BM72 1044 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 SIRPB1O00241 398 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 CCRL2O00421 344 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 PIN1P1O15428 100 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 GPX5O75715 221 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 LIPFP07098 398 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 SFTPBP07988 381 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 PPIAL4GP0DN37 164 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 BMXP51813 675 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 CAV3P56539 151 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 EDDM3BP56851 147 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 RIPPLY3P57055 190 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 FGF12P61328 243 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 SCGB2A2Q13296 93 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 EDDM3AQ14507 147 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 UBE2UQ5VVX9 321 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 CMTM4Q8IZR5 234 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 PXT1Q8NFP0 134 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 RHOFQ9HBH0 211 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 PCDHB16Q9NRJ7 776 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 METRNQ9UJH8 293 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 RPUSD1Q9UJJ7 312 aaKnown RBP12.86□□□□□ -0.35
TREX1-201ENST00000433541 MAB21L2Q9Y586 359 aa12.86□□□□□ -0.35
TREX1-201ENST00000433541 KIR2DS1A0A191URI9 304 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 TK1P04183 234 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 FAM157CP0CG43 387 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 SRMP19623 302 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 CALRP27797 417 aaKnown RBP12.85□□□□□ -0.35
TREX1-201ENST00000433541 MTNR1BP49286 362 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 FABP5Q01469 135 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 SLC22A6Q4U2R8 563 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 GLT8D1Q68CQ7 371 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 UNQ9370/PRO34162Q6UXP9 181 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 C1QL2Q7Z5L3 287 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 TSPAN14Q8NG11 270 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 OR4M1Q8NGD0 313 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 PPP1R35Q8TAP8 253 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 DCTN5Q9BTE1 182 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 CHST6Q9GZX3 395 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 NDUFB11Q9NX14 153 aa12.85□□□□□ -0.35
TREX1-201ENST00000433541 A0A087WXM4 84 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 HSPB6O14558 160 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 FCN3O75636 299 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 TOX4O94842 621 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 AVPP01185 164 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 IFNA2P01563 188 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 UCHL1P09936 223 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 MYL9P24844 172 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 ARF6P62330 175 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 RPL31P62899 125 aaKnown RBP12.84□□□□□ -0.35
TREX1-201ENST00000433541 BLMHQ13867 455 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 GRK1Q15835 563 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 SSX1Q16384 188 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 C11orf91Q3C1V1 193 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 CRIP3Q6Q6R5 217 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 GLIPR1L1Q6UWM5 242 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 OR5D13Q8NGL4 314 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 PHYHIPQ92561 330 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 OCEL1Q9H607 264 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 CNTD2Q9H8S5 307 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 PLGRKTQ9HBL7 147 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 ING3Q9NXR8 418 aa12.84□□□□□ -0.35
TREX1-201ENST00000433541 NAV3Q8IVL0 2385 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 IGHV3OR16-10A0A075B7F0 116 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 TRAV40A0A0B4J280 105 aa12.83□□□□□ -0.36
TREX1-201ENST00000433541 A0A1W2PPH5 198 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms