RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 DHHO43323 396 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 VAMP2P63027 116 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 CCL7P80098 99 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 SLC23A3Q6PIS1 610 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 LRP11Q86VZ4 500 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 ZNF845Q96IR2 970 aaPredicted RBP10.86□□□□□ -0.67
CDH3-202ENST00000429102 IL36RNQ9UBH0 155 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 ZNF107Q9UII5 783 aaPredicted RBP10.86□□□□□ -0.67
CDH3-202ENST00000429102 RBM7Q9Y580 266 aaKnown RBP10.86□□□□□ -0.67
CDH3-202ENST00000429102 GLB1P16278 677 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 RAB5AP20339 215 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 S100PP25815 95 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 TAGLN2P37802 199 aaKnown RBP10.86□□□□□ -0.67
CDH3-202ENST00000429102 GLP1RP43220 463 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 ZP4Q12836 540 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 SLC35G3Q8N808 338 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 OR2M3Q8NG83 312 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 TRBV6-7A0A0A0MS04 114 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 FIGNL2A6NMB9 653 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 CNOT4O95628 575 aaKnown RBP10.86□□□□□ -0.67
CDH3-202ENST00000429102 AADACP22760 399 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 NXPH1P58417 271 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 HLA-BQ31612 363 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 LHFPL1Q86WI0 220 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 ZNF695Q8IW36 515 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 SAT2Q96F10 170 aaPredicted RBP10.86□□□□□ -0.67
CDH3-202ENST00000429102 TP53RKQ96S44 253 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 KPTNQ9Y664 436 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 DOCK11Q5JSL3 2073 aa10.86□□□□□ -0.67
CDH3-202ENST00000429102 IGKV1-27A0A075B6S5 117 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 ZFP92A6NM28 416 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 ST8SIA3O43173 380 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 CFIP05156 583 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 OR14L1PQ8NHC6 308 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 SPACA9Q96E40 222 aaPredicted RBP10.85□□□□□ -0.67
CDH3-202ENST00000429102 SUCNR1Q9BXA5 334 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 NSG1A0A0A6YYJ2 146 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 ZNF32P17041 273 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 FGF8P55075 233 aaPredicted RBP10.85□□□□□ -0.67
CDH3-202ENST00000429102 GRB2P62993 217 aaKnown RBP10.85□□□□□ -0.67
CDH3-202ENST00000429102 HGFACQ04756 655 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 TSC22D1Q15714 1073 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 PNLIPRP3Q17RR3 467 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 SYT13Q7L8C5 426 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 OR10AD1Q8NGE0 317 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 OR6X1Q8NH79 312 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 NECAP2Q9NVZ3 263 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 ZNF724A8MTY0 619 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 HS3ST1O14792 307 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 CLN5O75503 358 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 CFPP27918 469 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 SNCAP37840 140 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 UBE2KP61086 200 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 LPAL2Q16609 132 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 RSPO1Q2MKA7 263 aaPredicted RBP10.85□□□□□ -0.67
CDH3-202ENST00000429102 OPN5Q6U736 354 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 C5orf46Q6UWT4 87 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 LCN15Q6UWW0 184 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 NECAP1Q8NC96 275 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 OR10D4PQ8NGN7 298 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 FGFBP3Q8TAT2 258 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 HAS2Q92819 552 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 SPTSSAQ969W0 71 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 ZNF488Q96MN9 340 aa10.85□□□□□ -0.67
CDH3-202ENST00000429102 EP300Q09472 2414 aaPredicted RBP10.85□□□□□ -0.67
CDH3-202ENST00000429102 SERPINE3A8MV23 424 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 TERTO14746 1132 aaKnown RBP10.84□□□□□ -0.67
CDH3-202ENST00000429102 MSTNO14793 375 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 CXCL13O43927 109 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 NRASP01111 189 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 CD5P06127 495 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 SLC35A1P78382 337 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 SMRP1Q8NCR6 262 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 NFAM1Q8NET5 270 aaPredicted RBP10.84□□□□□ -0.67
CDH3-202ENST00000429102 OR5C1Q8NGR4 320 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 NTNG2Q96CW9 530 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 NAA60Q9H7X0 242 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 E5RGE8 158 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 RBP2P50120 134 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 ZNF154Q13106 437 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 ENDOGQ14249 297 aaKnown RBP10.84□□□□□ -0.67
CDH3-202ENST00000429102 SHBQ15464 509 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 GFI1BQ5VTD9 330 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 ZNF561Q8N587 486 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 PLPP5Q8NEB5 264 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 RDH5Q92781 318 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 HS3ST6Q96QI5 342 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 DNAJB11Q9UBS4 358 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 NSG2Q9Y328 171 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 IGKV1-12A0A0C4DH73 117 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 A0A0J9YW62 118 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 ADAM20O43506 726 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 IGKV1D-12P01611 117 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 GPR157Q5UAW9 335 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 RHBDD2Q6NTF9 364 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 SGCZQ96LD1 299 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 PARP11Q9NR21 331 aa10.84□□□□□ -0.67
CDH3-202ENST00000429102 CNOT1A5YKK6 2376 aaKnown RBP10.83□□□□□ -0.68
CDH3-202ENST00000429102 TAAR5O14804 337 aa10.83□□□□□ -0.68
CDH3-202ENST00000429102 MT-ND4LP03901 98 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms