RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 A6NNC1 897 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 K7ESF4 209 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 MMP16P51512 607 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 SLC25A43Q8WUT9 341 aaPredicted RBP10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 ALKBH3Q96Q83 286 aaPredicted RBP10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 CDCA4Q9BXL8 241 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 TREM2Q9NZC2 230 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 NAT8Q9UHE5 227 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 A0A0B4J293 547 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 SNURFLB1AK76 121 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 FGF17O60258 216 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 BTF3P20290 206 aaKnown RBP10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 FBXL14Q8N1E6 418 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 BVESQ8NE79 360 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 ZNF519Q8TB69 540 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 PTX4Q96A99 478 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 EAF1Q96JC9 268 aaPredicted RBP10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 OXGR1Q96P68 337 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 MBNL1Q9NR56 388 aaKnown RBP10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 LPAR3Q9UBY5 353 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 H0Y8X5 98 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 ABLIM3O94929 683 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 FPR2P25090 351 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 TNXAQ16473 311 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 PRSS8Q16651 343 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 ASCL4Q6XD76 172 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 PIK3IP1Q96FE7 263 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 COA4Q9NYJ1 87 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 RASL12Q9NYN1 266 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 TUBD1Q9UJT1 453 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 SHPRHQ149N8 1683 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 GPX2P18283 190 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 MMP15P51511 669 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 NUFIP2Q7Z417 695 aaKnown RBP10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 ADAMTS17Q8TE56 1095 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 PATE1Q8WXA2 126 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 ALG14Q96F25 216 aa10.15□□□□□ -0.78
POLR2J4-202ENST00000427076 TYMSP04818 313 aa10.15□□□□□ -0.79
POLR2J4-202ENST00000427076 OR5AC1P0C628 307 aa10.15□□□□□ -0.79
POLR2J4-202ENST00000427076 PSG5Q15238 335 aa10.15□□□□□ -0.79
POLR2J4-202ENST00000427076 BSXQ3C1V8 233 aa10.15□□□□□ -0.79
POLR2J4-202ENST00000427076 TMEM215Q68D42 235 aa10.15□□□□□ -0.79
POLR2J4-202ENST00000427076 RNF165Q6ZSG1 346 aa10.15□□□□□ -0.79
POLR2J4-202ENST00000427076 DND1Q8IYX4 353 aaKnown RBP10.15□□□□□ -0.79
POLR2J4-202ENST00000427076 GABARAPL3Q9BY60 117 aa10.15□□□□□ -0.79
POLR2J4-202ENST00000427076 FBXL17Q9UF56 701 aa10.15□□□□□ -0.79
POLR2J4-202ENST00000427076 FAM74A7A6NL05 159 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 C11orf94C9JXX5 98 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 SLC25A17O43808 307 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 CTF1Q16619 201 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 FAM74A3Q4VXF1 159 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 EMC4Q5J8M3 183 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 ZNF343Q6P1L6 599 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 OR4P4Q8NGL7 312 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 OR10G8Q8NGN5 311 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 MS4A6EQ96DS6 147 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 NEIL1Q96FI4 390 aaPredicted RBP10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 PIPOXQ9P0Z9 390 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 CLEC1BQ9P126 229 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 ARFGEF2Q9Y6D5 1785 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 C9orf170A2RU37 121 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 LYZL6O75951 148 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 VAMP5O95183 116 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 TRGC2P03986 189 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 CXCL3P19876 107 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 FUT6P51993 359 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 CTAG1AP78358 180 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 TSPO2Q5TGU0 170 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 KIR3DX1Q9H7L2 352 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 HS3ST3A1Q9Y663 406 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 IGKV3D-15A0A087WSY6 115 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 IGKV6-21A0A0C4DH24 114 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 OR2W5A6NFC9 320 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 PLAUP00749 431 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 CA1P00915 261 aaPredicted RBP10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 NGFP01138 241 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 IGKV3-15P01624 115 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 RCC1P18754 421 aaPredicted RBP10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 CD81P60033 236 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 SURF2Q15527 256 aaPredicted RBP10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 GUCA2BQ16661 112 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 MRM1Q6IN84 353 aaKnown RBP10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 SSMEM1Q8WWF3 244 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 ZPBPQ9BS86 351 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 PIK3C2AO00443 1686 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 IGKV6D-21A0A0A0MT36 114 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 IGHV3-21A0A0B4J1V1 117 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 FGF2P09038 288 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 KLHDC9Q8NEP7 349 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 DPH3Q96FX2 82 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 IL36GQ9NZH8 169 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 KLF13Q9Y2Y9 288 aaPredicted RBP10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 KCNE3Q9Y6H6 103 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 LMX1BO60663 402 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 TMEM207Q6UWW9 146 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 SMIM4Q8WVI0 70 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 LRP12Q9Y561 859 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 FAM90A27PA6NNH2 459 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 IDSB3KWA1 339 aa10.14□□□□□ -0.79
POLR2J4-202ENST00000427076 SFT2D2O95562 160 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms