RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 GALP22466 123 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 PSMA1P25786 263 aaKnown RBP6.16□□□□□ -1.42
LINC01049-201ENST00000426840 MAPK3P27361 379 aaPredicted RBP6.16□□□□□ -1.42
LINC01049-201ENST00000426840 POU3F4P49335 361 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 SEC61A1P61619 476 aaKnown RBP6.16□□□□□ -1.42
LINC01049-201ENST00000426840 PPP3R1P63098 170 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 KIR3DS1Q14943 382 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 KCNJ8Q15842 424 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 NEDD8Q15843 81 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 MICBQ29980 383 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 DDI2Q5TDH0 399 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 WDR25Q64LD2 544 aaPredicted RBP6.16□□□□□ -1.42
LINC01049-201ENST00000426840 DUX4L9Q6RFH8 374 aaPredicted RBP6.16□□□□□ -1.42
LINC01049-201ENST00000426840 BIVMQ86UB2 503 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 SATL1Q86VE3 508 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 CDH26Q8IXH8 852 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 BATF2Q8N1L9 274 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 CD177Q8N6Q3 437 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 LINC01356Q8N9X3 169 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 ZSCAN4Q8NAM6 433 aaPredicted RBP6.16□□□□□ -1.42
LINC01049-201ENST00000426840 Q8NFD4 153 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 PXT1Q8NFP0 134 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 OR5D18Q8NGL1 313 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 OR51F2Q8NH61 342 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 MUL1Q969V5 352 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 RAB39BQ96DA2 213 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 NEIL1Q96FI4 390 aaPredicted RBP6.16□□□□□ -1.42
LINC01049-201ENST00000426840 CCL13Q99616 98 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 NKX3-1Q99801 234 aaPredicted RBP6.16□□□□□ -1.42
LINC01049-201ENST00000426840 DNTTIP1Q9H147 329 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 SEBOXQ9HB31 216 aaPredicted RBP6.16□□□□□ -1.42
LINC01049-201ENST00000426840 NDUFB11Q9NX14 153 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 NLKQ9UBE8 527 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 DNAJB11Q9UBS4 358 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 DUX4Q9UBX2 424 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 PFDN2Q9UHV9 154 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 ZNF222Q9UK12 451 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 MAB21L2Q9Y586 359 aa6.16□□□□□ -1.42
LINC01049-201ENST00000426840 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.16□□□□□ -1.42
LINC01049-201ENST00000426840 RFPL4AA6NLU0 287 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 NOTOA8MTQ0 251 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 A8MXK9 166 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 RFPL4AL1F8VTS6 287 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 TRAPPC2LH3BP13 241 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 PHF1O43189 567 aaPredicted RBP6.15□□□□□ -1.42
LINC01049-201ENST00000426840 NXPH2O95156 264 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 KNG1P01042 644 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 TGFAP01135 160 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 MAS1P04201 325 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 HEXAP06865 529 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 MSMBP08118 114 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 TMEM225BP0DP42 221 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 CALCBP10092 127 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 RPS2P15880 293 aaKnown RBP6.15□□□□□ -1.42
LINC01049-201ENST00000426840 FGF9P31371 208 aaPredicted RBP6.15□□□□□ -1.42
LINC01049-201ENST00000426840 PRDX2P32119 198 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 ZNF93P35789 620 aaPredicted RBP6.15□□□□□ -1.42
LINC01049-201ENST00000426840 PTGFRP43088 359 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 OR3A4PP47883 348 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 LCN2P80188 198 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 PAX2Q02962 417 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 HSD17B12Q53GQ0 312 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 C1orf100Q5SVJ3 147 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 CLEC9AQ6UXN8 241 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 LURAP1LQ8IV03 231 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 FAM58AQ8N1B3 248 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 FGFRL1Q8N441 504 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 OR8B3Q8NGG8 313 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 DACT3Q96B18 629 aaPredicted RBP6.15□□□□□ -1.42
LINC01049-201ENST00000426840 YIPF6Q96EC8 236 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 SDSLQ96GA7 329 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 GAFA1Q96PS6 74 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 OR8B2Q96RD0 313 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 GPER1Q99527 375 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 GFI1Q99684 422 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 OR51E2Q9H255 320 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 CNTD2Q9H8S5 307 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 RHOFQ9HBH0 211 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 SMURF1Q9HCE7 757 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 TCF7L1Q9HCS4 588 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 HMG20AQ9NP66 347 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 RBFOX1Q9NWB1 397 aaKnown RBP6.15□□□□□ -1.42
LINC01049-201ENST00000426840 CKLFQ9UBR5 152 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 ING4Q9UNL4 249 aa6.15□□□□□ -1.42
LINC01049-201ENST00000426840 WNK2Q9Y3S1 2297 aa6.15□□□□□ -1.43
LINC01049-201ENST00000426840 ANK3Q12955 4377 aaKnown RBP6.15□□□□□ -1.43
LINC01049-201ENST00000426840 TRAV1-2A0A0B4J238 106 aa6.14□□□□□ -1.43
LINC01049-201ENST00000426840 DVL1O14640 695 aa6.14□□□□□ -1.43
LINC01049-201ENST00000426840 SIGLEC5O15389 551 aa6.14□□□□□ -1.43
LINC01049-201ENST00000426840 FOXH1O75593 365 aa6.14□□□□□ -1.43
LINC01049-201ENST00000426840 ARL6IP5O75915 188 aa6.14□□□□□ -1.43
LINC01049-201ENST00000426840 CDRT1O95170 752 aa6.14□□□□□ -1.43
LINC01049-201ENST00000426840 CYB5AP00167 134 aa6.14□□□□□ -1.43
LINC01049-201ENST00000426840 SELLP14151 372 aa6.14□□□□□ -1.43
LINC01049-201ENST00000426840 CD36P16671 472 aa6.14□□□□□ -1.43
LINC01049-201ENST00000426840 GADD45AP24522 165 aa6.14□□□□□ -1.43
LINC01049-201ENST00000426840 GABRA2P47869 451 aa6.14□□□□□ -1.43
LINC01049-201ENST00000426840 PITPNBP48739 271 aa6.14□□□□□ -1.43
LINC01049-201ENST00000426840 CEBPDP49716 269 aaPredicted RBP6.14□□□□□ -1.43
LINC01049-201ENST00000426840 DVL1P1P54792 670 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 276.8 ms