RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 LAMA1P25391 3075 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 TMEM212A6NML5 194 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 SLC17A2O00624 439 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 PPP1CCP36873 323 aaKnown RBP14.04□□□□□ -0.16
PKP4-205ENST00000426248 SNCAP37840 140 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 RAB11AP62491 216 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 HNF4GQ14541 408 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 ADGRE4PQ86SQ3 457 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 UEVLDQ8IX04 471 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 POC1BQ8TC44 478 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 PRSS27Q9BQR3 290 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 CLDN16Q9Y5I7 305 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 AQP7O14520 342 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 CRTAPO75718 401 aaPredicted RBP14.04□□□□□ -0.16
PKP4-205ENST00000426248 UNQ9370/PRO34162Q6UXP9 181 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 OR10J5Q8NHC4 309 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 PRRX2Q99811 253 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 DOCK7Q96N67 2140 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 A8MWP6 167 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 CDRT15L2A8MXV6 281 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 DLEU1O43261 78 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 CCL3P10147 92 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 ATP1A1-AS1Q5TC04 95 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 CST9LP1Q5W188 147 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 SPINK14Q6IE38 97 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 TMPRSS11FQ6ZWK6 438 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 ARHGEF39Q8N4T4 335 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 TMEM37Q8WXS4 190 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 GALNT14Q96FL9 552 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 C2orf50Q96LR7 162 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 HIST1H2BLQ99880 126 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 SNHG12Q9BXW3 62 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 C1orf198Q9H425 327 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 GPR173Q9NS66 373 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 ZNF701Q9NV72 531 aaPredicted RBP14.04□□□□□ -0.16
PKP4-205ENST00000426248 KLHL13Q9P2N7 655 aa14.04□□□□□ -0.16
PKP4-205ENST00000426248 XKRY2A2RUG3 117 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 C10orf142B7Z368 130 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 TSPAN2O60636 221 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 ALOX5APP20292 161 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 MEP1BQ16820 701 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 ARSJQ5FYB0 599 aaPredicted RBP14.03□□□□□ -0.16
PKP4-205ENST00000426248 ZNF880Q6PDB4 577 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 OR10C1Q96KK4 312 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 VPS25Q9BRG1 176 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 SEMA5BQ9P283 1151 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 EFSO43281 561 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 KLF4O43474 513 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 SYT7O43581 403 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 MPIG6BO95866 241 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 MAJINQ3KP22 176 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 TMEM128Q5BJH2 165 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 NMES1Q9C002 83 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 OR51B6Q9H340 312 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 HAO2Q9NYQ3 351 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 MRM2Q9UI43 246 aaKnown RBP14.03□□□□□ -0.16
PKP4-205ENST00000426248 LIPGQ9Y5X9 500 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 A6NIZ1 184 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 C9orf172C9J069 976 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 OR3A1P47881 315 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 RAP1BP61224 184 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 DEFB109BQ30KR1 87 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 MRPL14Q6P1L8 145 aaKnown RBP14.03□□□□□ -0.16
PKP4-205ENST00000426248 PLXDC2Q6UX71 529 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 CLEC18BQ6UXF7 455 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 DPY19L2P2Q6ZN68 376 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 SLC16A9Q7RTY1 509 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 MMP25Q9NPA2 562 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 PARD6AQ9NPB6 346 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 MED29Q9NX70 200 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 SLC2A8Q9NY64 477 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 KLHDC2Q9Y2U9 406 aa14.03□□□□□ -0.16
PKP4-205ENST00000426248 NOTCH2Q04721 2471 aa14.02□□□□□ -0.16
PKP4-205ENST00000426248 LDLRAD4O15165 306 aa14.02□□□□□ -0.16
PKP4-205ENST00000426248 GLCEO94923 617 aa14.02□□□□□ -0.16
PKP4-205ENST00000426248 DNM1P34Q6PK57 102 aa14.02□□□□□ -0.16
PKP4-205ENST00000426248 FLVCR1Q9Y5Y0 555 aa14.02□□□□□ -0.16
PKP4-205ENST00000426248 SPG11Q96JI7 2443 aa14.02□□□□□ -0.16
PKP4-205ENST00000426248 IGHV1-45A0A0A0MS14 117 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 MSX1P28360 303 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 RPL23AP62750 156 aaKnown RBP14.02□□□□□ -0.17
PKP4-205ENST00000426248 CSNK2A1P68400 391 aaPredicted RBP14.02□□□□□ -0.17
PKP4-205ENST00000426248 PCOLCEQ15113 449 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 ZNF74Q16587 644 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 DBX2Q6ZNG2 339 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 CSNK2A3Q8NEV1 391 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 SGCZQ96LD1 299 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 SCGB3A2Q96PL1 93 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 SLC5A7Q9GZV3 580 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 SLC25A31Q9H0C2 315 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 BOKQ9UMX3 212 aaPredicted RBP14.02□□□□□ -0.17
PKP4-205ENST00000426248 CEP192Q8TEP8 1941 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 KLK10O43240 276 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 PAX5Q02548 391 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 PEAR1Q5VY43 1037 aaPredicted RBP14.02□□□□□ -0.17
PKP4-205ENST00000426248 ZNF66Q6ZN08 573 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 SPACA5Q96QH8 159 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 RTN4RQ9BZR6 473 aa14.02□□□□□ -0.17
PKP4-205ENST00000426248 IGHV3-15A0A0B4J1V0 119 aa14.01□□□□□ -0.17
PKP4-205ENST00000426248 SERPINA7P05543 415 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms