RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 C8orf4Q9NR00 106 aa11.29□□□□□ -0.6
NOD1-205ENST00000419799 MRPS18AQ9NVS2 196 aaKnown RBP11.29□□□□□ -0.6
NOD1-205ENST00000419799 KPTNQ9Y664 436 aa11.29□□□□□ -0.6
NOD1-205ENST00000419799 KMT2CQ8NEZ4 4911 aaKnown RBP11.29□□□□□ -0.6
NOD1-205ENST00000419799 TRBV2A0A0J9YWF9 115 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 MEX3AA1L020 520 aaKnown RBP11.28□□□□□ -0.6
NOD1-205ENST00000419799 CASQ2O14958 399 aaPredicted RBP11.28□□□□□ -0.6
NOD1-205ENST00000419799 GPR37O15354 613 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 ANGPTL7O43827 346 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 NOS1APO75052 506 aaPredicted RBP11.28□□□□□ -0.6
NOD1-205ENST00000419799 ZFPL1O95159 310 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 PIPP12273 146 aaPredicted RBP11.28□□□□□ -0.6
NOD1-205ENST00000419799 BCL3P20749 454 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 DUSP1P28562 367 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 CAPGP40121 348 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 SOX2P48431 317 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 RBP2P50120 134 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 CAV3P56539 151 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 COL10A1Q03692 680 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 VAX1Q5SQQ9 334 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 XAF1Q6GPH4 301 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 CMTM4Q8IZR5 234 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 C8orf59Q8N0T1 100 aaPredicted RBP11.28□□□□□ -0.6
NOD1-205ENST00000419799 PNKDQ8N490 385 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 Q8N7P7 452 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 ASCC1Q8N9N2 400 aaKnown RBP11.28□□□□□ -0.6
NOD1-205ENST00000419799 EMG1Q92979 244 aaKnown RBP11.28□□□□□ -0.6
NOD1-205ENST00000419799 OPALINQ96PE5 141 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 NEK6Q9HC98 313 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 C19orf12Q9NSK7 152 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 RBFOX1Q9NWB1 397 aaKnown RBP11.28□□□□□ -0.6
NOD1-205ENST00000419799 IL36RNQ9UBH0 155 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 CLEC2DQ9UHP7 191 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 DHDHQ9UQ10 334 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 DOCK11Q5JSL3 2073 aa11.28□□□□□ -0.6
NOD1-205ENST00000419799 NBEAL2Q6ZNJ1 2754 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 A0A0U1RQK1 487 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 TMEM212A6NML5 194 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 H0YAE9 185 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 XPNPEP2O43895 674 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 HCKP08631 526 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 CCDC159P0C7I6 412 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 MYL12AP19105 171 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 PRKACBP22694 351 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 DCKP27707 260 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 NPBWR2P48146 333 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 ERVK11-1P61568 191 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 GABPB1Q06547 395 aaPredicted RBP11.27□□□□□ -0.61
NOD1-205ENST00000419799 DHRS7BQ6IAN0 325 aaPredicted RBP11.27□□□□□ -0.61
NOD1-205ENST00000419799 TMPRSS11AQ6ZMR5 421 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 LHFPL2Q6ZUX7 228 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 UTS2BQ765I0 119 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 ZNF561Q8N587 486 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 GGHQ92820 318 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 TMEM80Q96HE8 168 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 VCXQ9H320 206 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 ZCCHC4Q9H5U6 513 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 HES4Q9HCC6 221 aa11.27□□□□□ -0.61
NOD1-205ENST00000419799 TET2Q6N021 2002 aaPredicted RBP11.26□□□□□ -0.61
NOD1-205ENST00000419799 IRGMA1A4Y4 181 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 CYB5AP00167 134 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 PRKACAP17612 351 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 TGFBR2P37173 567 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 SLC34A1Q06495 639 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 MRPL28Q13084 256 aaKnown RBP11.26□□□□□ -0.61
NOD1-205ENST00000419799 IL18R1Q13478 541 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 BLMHQ13867 455 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 HERPUD1Q15011 391 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 C11orf91Q3C1V1 193 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 MKXQ8IYA7 352 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 ZFP41Q8N8Y5 198 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 DNAAF1Q8NEP3 725 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 BPIFB6Q8NFQ5 453 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 C8orf46Q8TAG6 207 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 NKX3-1Q99801 234 aaPredicted RBP11.26□□□□□ -0.61
NOD1-205ENST00000419799 DCLRE1BQ9H816 532 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 CHCHD3Q9NX63 227 aaKnown RBP11.26□□□□□ -0.61
NOD1-205ENST00000419799 VPREB3Q9UKI3 123 aa11.26□□□□□ -0.61
NOD1-205ENST00000419799 DIMT1Q9UNQ2 313 aaKnown RBP11.26□□□□□ -0.61
NOD1-205ENST00000419799 CAB39Q9Y376 341 aaPredicted RBP11.26□□□□□ -0.61
NOD1-205ENST00000419799 EXOSC1Q9Y3B2 195 aaKnown RBP11.26□□□□□ -0.61
NOD1-205ENST00000419799 SIRT4Q9Y6E7 314 aaPredicted RBP11.26□□□□□ -0.61
NOD1-205ENST00000419799 PNMA8CA0A1B0GUJ8 204 aa11.25□□□□□ -0.61
NOD1-205ENST00000419799 RNASEK-C17orf49H0YIS7 233 aa11.25□□□□□ -0.61
NOD1-205ENST00000419799 TK1P04183 234 aa11.25□□□□□ -0.61
NOD1-205ENST00000419799 RPSAP08865 295 aaKnown RBP11.25□□□□□ -0.61
NOD1-205ENST00000419799 CCL3L1P16619 93 aa11.25□□□□□ -0.61
NOD1-205ENST00000419799 EDDM3BP56851 147 aa11.25□□□□□ -0.61
NOD1-205ENST00000419799 ERVFRD-1P60508 538 aa11.25□□□□□ -0.61
NOD1-205ENST00000419799 RPL31P62899 125 aaKnown RBP11.25□□□□□ -0.61
NOD1-205ENST00000419799 ST3GAL4Q11206 333 aa11.25□□□□□ -0.61
NOD1-205ENST00000419799 PDZK1IP1Q13113 114 aa11.25□□□□□ -0.61
NOD1-205ENST00000419799 EDDM3AQ14507 147 aa11.25□□□□□ -0.61
NOD1-205ENST00000419799 CDK5R1Q15078 307 aa11.25□□□□□ -0.61
NOD1-205ENST00000419799 TMEM200BQ69YZ2 307 aa11.25□□□□□ -0.61
NOD1-205ENST00000419799 LAIR2Q6ISS4 152 aa11.25□□□□□ -0.61
NOD1-205ENST00000419799 Q6ZTK2 550 aa11.25□□□□□ -0.61
NOD1-205ENST00000419799 AHSA2Q719I0 299 aa11.25□□□□□ -0.61
NOD1-205ENST00000419799 SATL1Q86VE3 508 aa11.25□□□□□ -0.61
NOD1-205ENST00000419799 OR13C5Q8NGS8 318 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms