RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 DNTTIP1Q9H147 329 aa12.53□□□□□ -0.4
HLA-DPA1-242ENST00000419277 DEFB127Q9H1M4 99 aa12.53□□□□□ -0.4
HLA-DPA1-242ENST00000419277 OBP2BQ9NPH6 170 aa12.53□□□□□ -0.4
HLA-DPA1-242ENST00000419277 CRYM-AS1A6NIL9 109 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 OR7C1O76099 320 aaPredicted RBP12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 IFNA21P01568 189 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 CCNOP22674 350 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SERPINF1P36955 418 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 UBE2NP61088 152 aaKnown RBP12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 EIF5AP63241 154 aaKnown RBP12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 IL24Q13007 206 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 GUSBP1Q15486 140 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RTN4RL2Q86UN3 420 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 COMMD7Q86VX2 200 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 C17orf78Q8N4C9 275 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 LRTM2Q8N967 370 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 STOML3Q8TAV4 291 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 HPSE2Q8WWQ2 592 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 OR5P3Q8WZ94 311 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 WNT2BQ93097 391 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 FAAP24Q9BTP7 215 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ZNF442Q9H7R0 627 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 PFDN2Q9UHV9 154 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ZNF230Q9UIE0 474 aaPredicted RBP12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 GPR160Q9UJ42 338 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 STARD10Q9Y365 291 aa12.52□□□□□ -0.41
HLA-DPA1-242ENST00000419277 WDFY4Q6ZS81 3184 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RNF222A6NCQ9 220 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 FAM25EA8MYX2 175 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 H7C1Q1 480 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 PLATP00750 562 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 HAAOP46952 286 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RBM39Q14498 530 aaKnown RBP12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 PIGYQ3MUY2 71 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 PRSS54Q6PEW0 395 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 TMPRSS7Q7RTY8 843 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 CALHM1Q8IU99 346 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 PDZD9Q8IXQ8 264 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 FDCSPQ8NFU4 85 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ST8SIA2Q92186 375 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 MOB3AQ96BX8 217 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ARPC5LQ9BPX5 153 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 PRSS50Q9UI38 385 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 TRBV6-6A0A0A6YYG2 114 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 TEX13DA0A0J9YY54 714 aaPredicted RBP12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SPAARA0A1B0GVQ0 90 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SDCBPO00560 298 aaPredicted RBP12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 CCSO14618 274 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 NMBP08949 121 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ZNF728P0DKX0 622 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 HOXC12P31275 282 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RTP5Q14D33 572 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 GABRA6Q16445 453 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ABCA11PQ4W5N1 156 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RNFT1Q5M7Z0 435 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ATP1A1-AS1Q5TC04 95 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 C9orf135Q5VTT2 229 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 IGFL3Q6UXB1 125 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 EIF4E3Q8N5X7 224 aaKnown RBP12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RTL8AQ9BWD3 113 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 METTL8Q9H825 291 aaKnown RBP12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 TREM2Q9NZC2 230 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 MBD2Q9UBB5 411 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 POLDIP2Q9Y2S7 368 aa12.51□□□□□ -0.41
HLA-DPA1-242ENST00000419277 MED12LQ86YW9 2145 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 hCG_1807616A0A1W2PRN6 198 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ZNF503-AS2A6NEH8 195 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 AHRRA9YTQ3 701 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ZNF732B4DXR9 585 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 TAAR5O14804 337 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 NAPSAO96009 420 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ZNF14P17017 642 aaPredicted RBP12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 COX5AP20674 150 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 MDH2P40926 338 aaKnown RBP12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 P2RX3P56373 397 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 HERV-K104P61576 105 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 C3AR1Q16581 482 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 DMRTC1Q5HYR2 192 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 MOB1BQ7L9L4 216 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 ZNF75AQ96N20 296 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 AQP10Q96PS8 301 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 C12orf49Q9H741 205 aa12.5□□□□□ -0.41
HLA-DPA1-242ENST00000419277 EEF1E1-BLOC1S5C9J1V9 151 aa12.49□□□□□ -0.41
HLA-DPA1-242ENST00000419277 J3QT63 122 aa12.49□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SHOXO15266 292 aa12.49□□□□□ -0.41
HLA-DPA1-242ENST00000419277 NKX2-8O15522 239 aa12.49□□□□□ -0.41
HLA-DPA1-242ENST00000419277 DIRAS3O95661 229 aa12.49□□□□□ -0.41
HLA-DPA1-242ENST00000419277 RAC2P15153 192 aa12.49□□□□□ -0.41
HLA-DPA1-242ENST00000419277 CCL11P51671 97 aa12.49□□□□□ -0.41
HLA-DPA1-242ENST00000419277 GPM6AP51674 278 aa12.49□□□□□ -0.41
HLA-DPA1-242ENST00000419277 TOR2AQ5JU69 321 aa12.49□□□□□ -0.41
HLA-DPA1-242ENST00000419277 VASH2Q86V25 355 aa12.49□□□□□ -0.41
HLA-DPA1-242ENST00000419277 MDP1Q86V88 176 aa12.49□□□□□ -0.41
HLA-DPA1-242ENST00000419277 SEC22AQ96IW7 307 aa12.49□□□□□ -0.41
HLA-DPA1-242ENST00000419277 MICU1Q9BPX6 476 aa12.49□□□□□ -0.41
HLA-DPA1-242ENST00000419277 NAA60Q9H7X0 242 aa12.49□□□□□ -0.41
HLA-DPA1-242ENST00000419277 CDH20Q9HBT6 801 aa12.49□□□□□ -0.41
HLA-DPA1-242ENST00000419277 LRP5LA4QPB2 252 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 TMEM210A6NLX4 147 aa12.48□□□□□ -0.41
HLA-DPA1-242ENST00000419277 KRBOX1C9JBD0 128 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms