RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 Q8IYB0 196 aa16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 FAM58AQ8N1B3 248 aa16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 OR51A2Q8NGJ7 313 aa16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 EMG1Q92979 244 aaKnown RBP16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 SMIM19Q96E16 107 aa16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 COMMD4Q9H0A8 199 aa16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 HMG20AQ9NP66 347 aa16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 CNOT2Q9NZN8 540 aaKnown RBP16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 CMYA5Q8N3K9 4069 aa16.84■□□□□ 0.29
PKNOX1-202ENST00000418336 TRBV5-5A0A0J9YX44 114 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 A0A1W2PQ09 198 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 HAND1O96004 215 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 CCL3L1P16619 93 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 CFPP27918 469 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 C21orf33P30042 268 aaPredicted RBP16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 IER3P46695 156 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 UBE2E1P51965 193 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 AWAT1Q58HT5 328 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 SAXO1Q8IYX7 474 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 FAM185AQ8N0U4 392 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 OR8H2Q8N162 312 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 TMEM86BQ8N661 226 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 OR5D18Q8NGL1 313 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 OR13C5Q8NGS8 318 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 C17orf50Q8WW18 174 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 SLC25A28Q96A46 364 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 CHIAQ9BZP6 476 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 DHDHQ9UQ10 334 aa16.83■□□□□ 0.28
PKNOX1-202ENST00000418336 C17orf98A8MV24 154 aa16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 NPFFO15130 113 aa16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 RPSAP08865 295 aaKnown RBP16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 DUSP1P28562 367 aa16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 CAPZA1P52907 286 aa16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 AQP4P55087 323 aa16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 RELBQ01201 579 aa16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 KISS1Q15726 138 aa16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 C16orf87Q6PH81 154 aa16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 TMPRSS11AQ6ZMR5 421 aa16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 OR4S1Q8NGB4 309 aa16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 OR5D14Q8NGL3 314 aa16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 GCDHQ92947 438 aaPredicted RBP16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 SNX22Q96L94 193 aa16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 TAS2R4Q9NYW5 299 aa16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 ZNRD1Q9P1U0 126 aa16.82■□□□□ 0.28
PKNOX1-202ENST00000418336 EFCAB10A6NFE3 127 aa16.81■□□□□ 0.28
PKNOX1-202ENST00000418336 H0YJX3 145 aa16.81■□□□□ 0.28
PKNOX1-202ENST00000418336 LMO1P25800 156 aa16.81■□□□□ 0.28
PKNOX1-202ENST00000418336 SAA4P35542 130 aa16.81■□□□□ 0.28
PKNOX1-202ENST00000418336 OR3A1P47881 315 aa16.81■□□□□ 0.28
PKNOX1-202ENST00000418336 SOX2P48431 317 aa16.81■□□□□ 0.28
PKNOX1-202ENST00000418336 GUCA2AQ02747 115 aa16.81■□□□□ 0.28
PKNOX1-202ENST00000418336 SPIN3Q5JUX0 258 aa16.81■□□□□ 0.28
PKNOX1-202ENST00000418336 Q6P435 159 aa16.81■□□□□ 0.28
PKNOX1-202ENST00000418336 C12orf54Q6X4T0 127 aa16.81■□□□□ 0.28
PKNOX1-202ENST00000418336 GPR148Q8TDV2 347 aa16.81■□□□□ 0.28
PKNOX1-202ENST00000418336 ORAI1Q96D31 301 aa16.81■□□□□ 0.28
PKNOX1-202ENST00000418336 POMT1Q9Y6A1 747 aa16.81■□□□□ 0.28
PKNOX1-202ENST00000418336 A0A1W2PRD5 423 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 A0A1W2PRF3 423 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 A0A1W2PRM7 423 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 GABRPO00591 440 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 IGHV4-59P01825 116 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 PRKACAP17612 351 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 IGFBP3P17936 291 aaPredicted RBP16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 MYL12AP19105 171 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 TAF9Q16594 264 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 NCR3LG1Q68D85 454 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 ASCL4Q6XD76 172 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 ZFP41Q8N8Y5 198 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 ASCC1Q8N9N2 400 aaKnown RBP16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 ZSCAN4Q8NAM6 433 aaPredicted RBP16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 Q8NFD4 153 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 TSEN15Q8WW01 171 aaKnown RBP16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 SGCDQ92629 289 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 GHSRQ92847 366 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 ZDHHC16Q969W1 377 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 RHOFQ9HBH0 211 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 PAK1IP1Q9NWT1 392 aaPredicted RBP16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 ZNF281Q9Y2X9 895 aa16.8■□□□□ 0.28
PKNOX1-202ENST00000418336 MEGF11A6BM72 1044 aa16.79■□□□□ 0.28
PKNOX1-202ENST00000418336 ACSM1Q08AH1 577 aa16.79■□□□□ 0.28
PKNOX1-202ENST00000418336 AHSA2Q719I0 299 aa16.79■□□□□ 0.28
PKNOX1-202ENST00000418336 NANOGP1Q8N7R0 232 aa16.79■□□□□ 0.28
PKNOX1-202ENST00000418336 BPIFB6Q8NFQ5 453 aa16.79■□□□□ 0.28
PKNOX1-202ENST00000418336 OR5D13Q8NGL4 314 aa16.79■□□□□ 0.28
PKNOX1-202ENST00000418336 SSMEM1Q8WWF3 244 aa16.79■□□□□ 0.28
PKNOX1-202ENST00000418336 TMEM106AQ96A25 262 aa16.79■□□□□ 0.28
PKNOX1-202ENST00000418336 NKX3-1Q99801 234 aaPredicted RBP16.79■□□□□ 0.28
PKNOX1-202ENST00000418336 TRBV5-7A0A0A0MS05 114 aa16.78■□□□□ 0.28
PKNOX1-202ENST00000418336 MEX3AA1L020 520 aaKnown RBP16.78■□□□□ 0.28
PKNOX1-202ENST00000418336 MAGEA13PA6NCF6 341 aa16.78■□□□□ 0.28
PKNOX1-202ENST00000418336 FAM181BA6NEQ2 426 aa16.78■□□□□ 0.28
PKNOX1-202ENST00000418336 GPX5O75715 221 aa16.78■□□□□ 0.28
PKNOX1-202ENST00000418336 OR2H2O95918 312 aa16.78■□□□□ 0.28
PKNOX1-202ENST00000418336 ALDOBP05062 364 aa16.78■□□□□ 0.28
PKNOX1-202ENST00000418336 RAB3AP20336 220 aa16.78■□□□□ 0.28
PKNOX1-202ENST00000418336 LDLRAD2Q5SZI1 272 aa16.78■□□□□ 0.28
PKNOX1-202ENST00000418336 RNLSQ5VYX0 342 aa16.78■□□□□ 0.28
PKNOX1-202ENST00000418336 ELP2Q6IA86 826 aa16.78■□□□□ 0.28
PKNOX1-202ENST00000418336 TPRX1Q8N7U7 411 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms