RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 DUX4L9Q6RFH8 374 aaPredicted RBP13.67□□□□□ -0.22
LINC00398-201ENST00000414407 BTNL3Q6UXE8 466 aa13.67□□□□□ -0.22
LINC00398-201ENST00000414407 C1QL2Q7Z5L3 287 aa13.67□□□□□ -0.22
LINC00398-201ENST00000414407 LRRTM1Q86UE6 522 aa13.67□□□□□ -0.22
LINC00398-201ENST00000414407 BATF2Q8N1L9 274 aa13.67□□□□□ -0.22
LINC00398-201ENST00000414407 JAGN1Q8N5M9 183 aa13.67□□□□□ -0.22
LINC00398-201ENST00000414407 TEX29Q8N6K0 151 aa13.67□□□□□ -0.22
LINC00398-201ENST00000414407 S100A13Q99584 98 aa13.67□□□□□ -0.22
LINC00398-201ENST00000414407 FAM234AQ9H0X4 552 aa13.67□□□□□ -0.22
LINC00398-201ENST00000414407 METTL9Q9H1A3 318 aa13.67□□□□□ -0.22
LINC00398-201ENST00000414407 MMP26Q9NRE1 261 aa13.67□□□□□ -0.22
LINC00398-201ENST00000414407 DUX4Q9UBX2 424 aa13.67□□□□□ -0.22
LINC00398-201ENST00000414407 SLC25A10Q9UBX3 287 aaPredicted RBP13.67□□□□□ -0.22
LINC00398-201ENST00000414407 CDC42EP3Q9UKI2 254 aa13.67□□□□□ -0.22
LINC00398-201ENST00000414407 ENSAO43768 121 aaKnown RBP13.66□□□□□ -0.22
LINC00398-201ENST00000414407 ADRA2CP18825 462 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 HNF1AP20823 631 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 OR3A4PP47883 348 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 FGF12P61328 243 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 IKZF1Q13422 519 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 GPR176Q14439 515 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 RSU1Q15404 277 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 FAM120AOSQ5T036 256 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 GLT8D1Q68CQ7 371 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 FAHD2BQ6P2I3 314 aaPredicted RBP13.66□□□□□ -0.22
LINC00398-201ENST00000414407 BTN2A1Q7KYR7 527 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 ZNRF1Q8ND25 227 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 OR51T1Q8NGJ9 327 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 C8orf46Q8TAG6 207 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 ST8SIA4Q92187 359 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 MUL1Q969V5 352 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 FAHD2AQ96GK7 314 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 TMPRSS13Q9BYE2 586 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 FAM192AQ9GZU8 254 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 CNTD2Q9H8S5 307 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 OR14J1Q9UGF5 321 aa13.66□□□□□ -0.22
LINC00398-201ENST00000414407 C22orf46C9J442 243 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 SH2D1BO14796 132 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 CRLF1O75462 422 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 HAND1O96004 215 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 TFF1P04155 84 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 SELLP14151 372 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 FGF9P31371 208 aaPredicted RBP13.65□□□□□ -0.22
LINC00398-201ENST00000414407 PAX8Q06710 450 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 NEDD8Q15843 81 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 NHLRC3Q5JS37 347 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 LY6G5BQ8NDX9 201 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 TBC1D15Q8TC07 691 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 NUDT16L1Q9BRJ7 211 aaKnown RBP13.65□□□□□ -0.22
LINC00398-201ENST00000414407 DCTN5Q9BTE1 182 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 SHARPINQ9H0F6 387 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 C7orf69Q9H7B7 122 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 ELL3Q9HB65 397 aaPredicted RBP13.65□□□□□ -0.22
LINC00398-201ENST00000414407 GHRLQ9UBU3 117 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 RPUSD1Q9UJJ7 312 aaKnown RBP13.65□□□□□ -0.22
LINC00398-201ENST00000414407 ING4Q9UNL4 249 aa13.65□□□□□ -0.22
LINC00398-201ENST00000414407 NSD1Q96L73 2696 aaPredicted RBP13.65□□□□□ -0.22
LINC00398-201ENST00000414407 TRAV1-2A0A0B4J238 106 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 K7N7A8 449 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 ZNF737O75373 536 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 TK1P04183 234 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 PPIAL4GP0DN37 164 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 JUNBP17275 347 aaPredicted RBP13.64□□□□□ -0.23
LINC00398-201ENST00000414407 LMO1P25800 156 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 CALRP27797 417 aaKnown RBP13.64□□□□□ -0.23
LINC00398-201ENST00000414407 CEBPDP49716 269 aaPredicted RBP13.64□□□□□ -0.23
LINC00398-201ENST00000414407 PSMD7P51665 324 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 COL10A1Q03692 680 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 IL13RA2Q14627 380 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 C1orf100Q5SVJ3 147 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 CHST4Q8NCG5 386 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 TMEM185AQ8NFB2 350 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 OR5D13Q8NGL4 314 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 SNX22Q96L94 193 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 MRI1Q9BV20 369 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 BEX2Q9BXY8 128 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 EXOSC4Q9NPD3 245 aaKnown RBP13.64□□□□□ -0.23
LINC00398-201ENST00000414407 IL36RNQ9UBH0 155 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 METRNQ9UJH8 293 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 STUB1Q9UNE7 303 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 GSTK1Q9Y2Q3 226 aa13.64□□□□□ -0.23
LINC00398-201ENST00000414407 MRPS28Q9Y2Q9 187 aaKnown RBP13.64□□□□□ -0.23
LINC00398-201ENST00000414407 DOCK11Q5JSL3 2073 aa13.63□□□□□ -0.23
LINC00398-201ENST00000414407 TRBV23-1A0A0A0MS06 115 aa13.63□□□□□ -0.23
LINC00398-201ENST00000414407 CDRT1O95170 752 aa13.63□□□□□ -0.23
LINC00398-201ENST00000414407 CSTBP04080 98 aaKnown RBP13.63□□□□□ -0.23
LINC00398-201ENST00000414407 UBBP0CG47 229 aa13.63□□□□□ -0.23
LINC00398-201ENST00000414407 NDUFB7P17568 137 aa13.63□□□□□ -0.23
LINC00398-201ENST00000414407 RANBP1P43487 201 aa13.63□□□□□ -0.23
LINC00398-201ENST00000414407 CHRFAM7AQ494W8 412 aa13.63□□□□□ -0.23
LINC00398-201ENST00000414407 GLIPR1L1Q6UWM5 242 aa13.63□□□□□ -0.23
LINC00398-201ENST00000414407 PPP1R35Q8TAP8 253 aa13.63□□□□□ -0.23
LINC00398-201ENST00000414407 MRPS24Q96EL2 167 aaKnown RBP13.63□□□□□ -0.23
LINC00398-201ENST00000414407 NKX3-1Q99801 234 aaPredicted RBP13.63□□□□□ -0.23
LINC00398-201ENST00000414407 OPN4Q9UHM6 478 aa13.63□□□□□ -0.23
LINC00398-201ENST00000414407 AUP1Q9Y679 476 aa13.63□□□□□ -0.23
LINC00398-201ENST00000414407 PDCD5O14737 125 aa13.62□□□□□ -0.23
LINC00398-201ENST00000414407 HTR3BO95264 441 aa13.62□□□□□ -0.23
LINC00398-201ENST00000414407 CALCBP10092 127 aa13.62□□□□□ -0.23
LINC00398-201ENST00000414407 GTF2F2P13984 249 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms