RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 UBA52P62987 128 aaKnown RBP10.79□□□□□ -0.68
SSB-203ENST00000413002 MED21Q13503 144 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 PDCD1Q15116 288 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 KISS1Q15726 138 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 TUSC1Q2TAM9 212 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 C11orf91Q3C1V1 193 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 TMEM200BQ69YZ2 307 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 DMKNQ6E0U4 476 aaPredicted RBP10.79□□□□□ -0.68
SSB-203ENST00000413002 C9orf139Q6ZV77 190 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 CMTM4Q8IZR5 234 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 OR52N4Q8NGI2 321 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 SPATA3Q8NHX4 192 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 TMEM106AQ96A25 262 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 SMIM19Q96E16 107 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 JMJD8Q96S16 334 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 CHST6Q9GZX3 395 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 FKBP14Q9NWM8 211 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 PAK1IP1Q9NWT1 392 aaPredicted RBP10.79□□□□□ -0.68
SSB-203ENST00000413002 GSTK1Q9Y2Q3 226 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 ZNF281Q9Y2X9 895 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 PCDHGB5Q9Y5G0 923 aa10.79□□□□□ -0.68
SSB-203ENST00000413002 A0A0U1RQK1 487 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 RNASEK-C17orf49H0YIS7 233 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 H0YJX3 145 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 SIRPB1O00241 398 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 ZNF737O75373 536 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 ATP6V1G2O95670 118 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 CHRM2P08172 466 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 RAB3AP20336 220 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 EDDM3BP56851 147 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 ZP1P60852 638 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 RPS11P62280 158 aaKnown RBP eCLIP10.78□□□□□ -0.68
SSB-203ENST00000413002 ACTG1P63261 375 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 SCN1BQ07699 218 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 EDDM3AQ14507 147 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 ZNF273Q14593 569 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 KIR3DL3Q8N743 410 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 NANOGP1Q8N7R0 232 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 TPRX1Q8N7U7 411 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 OR10K1Q8NGX5 313 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 HAVCR2Q8TDQ0 301 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 PGLYRP3Q96LB9 341 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 HMG20AQ9NP66 347 aa10.78□□□□□ -0.68
SSB-203ENST00000413002 TENM1Q9UKZ4 2725 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 TRBV23-1A0A0A0MS06 115 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 MAGEA13PA6NCF6 341 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 K7N7A8 449 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 GABRPO00591 440 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 HOXA3O43365 443 aaPredicted RBP10.77□□□□□ -0.69
SSB-203ENST00000413002 PSPNO60542 156 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 KDM4BO94953 1096 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 CDK1P06493 297 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 CD2P06729 351 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 CELP19835 753 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 MYF6P23409 242 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 GABRR1P24046 479 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 WNT4P56705 351 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 SLC9A3R2Q15599 337 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 ZNF529Q6P280 563 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 C17orf107Q6ZR85 190 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 OR4S1Q8NGB4 309 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 TNFRSF14Q92956 283 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 OR14A2Q96R54 314 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 OR5M11Q96RB7 305 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 NR1H4Q96RI1 486 aaPredicted RBP10.77□□□□□ -0.69
SSB-203ENST00000413002 GPER1Q99527 375 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 FAM192AQ9GZU8 254 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 ING3Q9NXR8 418 aa10.77□□□□□ -0.69
SSB-203ENST00000413002 TRAV8-7A0A075B6U6 113 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 TRBV5-5A0A0J9YX44 114 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 MAGEB3O15480 346 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 ALX3O95076 343 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 CDRT1O95170 752 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 PRTN3P24158 256 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 OR3A4PP47883 348 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 INSL4Q14641 139 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 GRK1Q15835 563 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 ZNF782Q6ZMW2 699 aaPredicted RBP10.76□□□□□ -0.69
SSB-203ENST00000413002 GDPD3Q7L5L3 318 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 Q8IYB0 196 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 C11orf42Q8N5U0 333 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 FAM216AQ8WUB2 273 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 TNFAIP8L1Q8WVP5 186 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 MYDGFQ969H8 173 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 CNBD2Q96M20 576 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 ANKRD60Q9BZ19 345 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 VCX3BQ9H321 246 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 METTL8Q9H825 291 aaKnown RBP10.76□□□□□ -0.69
SSB-203ENST00000413002 SCN3BQ9NY72 215 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 ERGIC3Q9Y282 383 aa10.76□□□□□ -0.69
SSB-203ENST00000413002 M0R1W7 72 aa10.75□□□□□ -0.69
SSB-203ENST00000413002 OR2H2O95918 312 aa10.75□□□□□ -0.69
SSB-203ENST00000413002 COX7A1P24310 79 aa10.75□□□□□ -0.69
SSB-203ENST00000413002 PAX6P26367 422 aa10.75□□□□□ -0.69
SSB-203ENST00000413002 PPP3R1P63098 170 aa10.75□□□□□ -0.69
SSB-203ENST00000413002 BLMHQ13867 455 aa10.75□□□□□ -0.69
SSB-203ENST00000413002 ZNF146Q15072 292 aa10.75□□□□□ -0.69
SSB-203ENST00000413002 Q499Y3 187 aa10.75□□□□□ -0.69
SSB-203ENST00000413002 YIF1BQ5BJH7 314 aa10.75□□□□□ -0.69
SSB-203ENST00000413002 DDI2Q5TDH0 399 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms