RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 AMY2BP19961 511 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 GABRR1P24046 479 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 SOX6P35712 828 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 FGF12P61328 243 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 QRFPP83859 136 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 MADCAM1Q13477 382 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 TAF9Q16594 264 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 BRICD5Q6PL45 260 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 DNM1P46Q6ZS02 220 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 OSR2Q8N2R0 312 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 FAM216BQ8N7L0 139 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 MYOZ1Q9NP98 299 aaPredicted RBP11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 AKIP1Q9NQ31 210 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 ST3GAL6Q9Y274 331 aa11.79□□□□□ -0.52
CHRNA1-204ENST00000409323 ARHGAP32A7KAX9 2087 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 TRAV38-1A0A0B4J264 116 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 IGHV4-61A0A0C4DH41 118 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 RNF223E7ERA6 249 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 IFNL4K9M1U5 179 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 SIRPB1O00241 398 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 BPNT1O95861 308 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 GTF2F2P13984 249 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 GIFP27352 417 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 IL2RGP31785 369 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 MDH2P40926 338 aaKnown RBP11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 ETV6P41212 452 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 NR4A2P43354 598 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 SEC61A1P61619 476 aaKnown RBP11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 IKZF1Q13422 519 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 TEX36Q5VZQ5 186 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 BIVMQ86UB2 503 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 LRRC28Q86X40 367 aaPredicted RBP11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 MCFD2Q8NI22 146 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 TMEM59Q9BXS4 323 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 ING3Q9NXR8 418 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 COMMD3Q9UBI1 195 aa11.78□□□□□ -0.52
CHRNA1-204ENST00000409323 VPS13CQ709C8 3753 aa11.77□□□□□ -0.52
CHRNA1-204ENST00000409323 A0A0A6YYD4 124 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 CEACAM18A8MTB9 384 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 TMEM14DPA8MWL7 114 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 TMPRSS2O15393 492 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 ADAM20O43506 726 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 HAND1O96004 215 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 RBM11P57052 281 aaKnown RBP11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 COL10A1Q03692 680 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 STUMQ69YW2 141 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 Q8IYB0 196 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 ZNRF1Q8ND25 227 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 OR51T1Q8NGJ9 327 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 CLDND2Q8NHS1 167 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 ANGPTL6Q8NI99 470 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 S100ZQ8WXG8 99 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 CHST6Q9GZX3 395 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 CST11Q9H112 138 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 IL36GQ9NZH8 169 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 CTSZQ9UBR2 303 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 PCDHB10Q9UN67 800 aa11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 MAP1AP78559 2803 aaPredicted RBP11.77□□□□□ -0.53
CHRNA1-204ENST00000409323 SETXQ7Z333 2677 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 MEX3AA1L020 520 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 VWC2LB2RUY7 222 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 LDLRAD4O15165 306 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 TMEM127O75204 238 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 FCN3O75636 299 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 OR7C1O76099 320 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 OR2H2O95918 312 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 KNG1P01042 644 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 ACAA1P09110 424 aaPredicted RBP11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 CSF3P09919 207 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 ZNF44P15621 663 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 PRDX2P32119 198 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 DYNC1I2Q13409 638 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 MOGAT2Q3SYC2 334 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 ELP2Q6IA86 826 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 MFSD4AQ8N468 514 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 ASCC1Q8N9N2 400 aaKnown RBP11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 GAFA1Q96PS6 74 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 FOXC2Q99958 501 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 RASL12Q9NYN1 266 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 ZNF222Q9UK12 451 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 PEX16Q9Y5Y5 336 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 DOCK11Q5JSL3 2073 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 CR1P17927 2039 aa11.76□□□□□ -0.53
CHRNA1-204ENST00000409323 ZNF780AO75290 641 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 UBBP0CG47 229 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 RPS2P15880 293 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 MUC1P15941 1255 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 CFPP27918 469 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 VEGFCP49767 419 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 GPR176Q14439 515 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 NKAPLQ5M9Q1 402 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 ATAD3CQ5T2N8 411 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 FIP1L1Q6UN15 594 aaKnown RBP11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 CROCCP3Q8IVE0 287 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 CIARTQ8N365 385 aaPredicted RBP11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 BPIFB2Q8N4F0 458 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 SAMD12Q8N8I0 201 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 KCNG3Q8TAE7 436 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 DYRK2Q92630 601 aa11.75□□□□□ -0.53
CHRNA1-204ENST00000409323 SLC25A38Q96DW6 304 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms