RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 HSPA13P48723 471 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 SNU13P55769 128 aaKnown RBP14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 BLMHQ13867 455 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 ZNF529Q6P280 563 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 CRIP3Q6Q6R5 217 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 SATL1Q86VE3 508 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 SAXO1Q8IYX7 474 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 Q8N7P7 452 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 OR13C5Q8NGS8 318 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 GPER1Q99527 375 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 ANKRD60Q9BZ19 345 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 GLS2Q9UI32 602 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 TPRKBQ9Y3C4 175 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 KDM4BO94953 1096 aa14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 DEFB112Q30KQ8 113 aa14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 YIF1BQ5BJH7 314 aa14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 RNLSQ5VYX0 342 aa14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 TMEM200BQ69YZ2 307 aa14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 ASPHD2Q6ICH7 369 aa14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 ZSCAN4Q8NAM6 433 aaPredicted RBP14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 OR51A2Q8NGJ7 313 aa14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 TBC1D15Q8TC07 691 aa14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 ZDHHC16Q969W1 377 aa14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 CPNE2Q96FN4 548 aaPredicted RBP14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 SNX22Q96L94 193 aa14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 PGLYRP3Q96LB9 341 aa14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 SEBOXQ9HB31 216 aaPredicted RBP14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 HMG20AQ9NP66 347 aa14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 GSTK1Q9Y2Q3 226 aa14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 PCDHGB5Q9Y5G0 923 aa14.74□□□□□ -0.05
PDLIM2-206ENST00000409141 TRBV5-5A0A0J9YX44 114 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 MDFIC2A0A1B0GVS7 189 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 A0A1W2PPH5 198 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 ZNF737O75373 536 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 CELP19835 753 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 ZP1P60852 638 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 UBA52P62987 128 aaKnown RBP14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 PPP3R1P63098 170 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 PRB3Q04118 309 aaPredicted RBP14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 ZNF146Q15072 292 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 Q499Y3 187 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 SPIN3Q5JUX0 258 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 GDPD3Q7L5L3 318 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 OR52N4Q8NGI2 321 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 OR5D13Q8NGL4 314 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 FAM216AQ8WUB2 273 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 ORAI1Q96D31 301 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 DUX5Q96PT3 197 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 MND1Q9BWT6 205 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 CDCA4Q9BXL8 241 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 METTL8Q9H825 291 aaKnown RBP14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 RHOFQ9HBH0 211 aa14.73□□□□□ -0.05
PDLIM2-206ENST00000409141 TMEM82A0PJX8 343 aa14.72□□□□□ -0.05
PDLIM2-206ENST00000409141 DNAJC9-AS1A6NH13 148 aa14.72□□□□□ -0.05
PDLIM2-206ENST00000409141 SH2D1BO14796 132 aa14.72□□□□□ -0.05
PDLIM2-206ENST00000409141 GABRR1P24046 479 aa14.72□□□□□ -0.05
PDLIM2-206ENST00000409141 DLX1P56177 255 aa14.72□□□□□ -0.05
PDLIM2-206ENST00000409141 EDDM3BP56851 147 aa14.72□□□□□ -0.05
PDLIM2-206ENST00000409141 RPS11P62280 158 aaKnown RBP eCLIP14.72□□□□□ -0.05
PDLIM2-206ENST00000409141 METAP1DQ6UB28 335 aaPredicted RBP14.72□□□□□ -0.05
PDLIM2-206ENST00000409141 OR8H2Q8N162 312 aa14.72□□□□□ -0.05
PDLIM2-206ENST00000409141 SGCDQ92629 289 aa14.72□□□□□ -0.05
PDLIM2-206ENST00000409141 TMEM138Q9NPI0 162 aa14.72□□□□□ -0.05
PDLIM2-206ENST00000409141 PAK1IP1Q9NWT1 392 aaPredicted RBP14.72□□□□□ -0.05
PDLIM2-206ENST00000409141 RNASEK-C17orf49H0YIS7 233 aa14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 ALDOBP05062 364 aa14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 CD1AP06126 327 aa14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 PRTN3P24158 256 aa14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 ACTG1P63261 375 aa14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 SLC35A2P78381 396 aa14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 GUCA2AQ02747 115 aa14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 DOC2BQ14184 412 aa14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 C17orf107Q6ZR85 190 aa14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 TNFAIP8L1Q8WVP5 186 aa14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 TNFRSF14Q92956 283 aa14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 OR14A2Q96R54 314 aa14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 PRDM13Q9H4Q3 707 aa14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 UNKLQ9H9P5 680 aaKnown RBP14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 EXOSC4Q9NPD3 245 aaKnown RBP14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 NOX4Q9NPH5 578 aa14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 CKLFQ9UBR5 152 aa14.71□□□□□ -0.05
PDLIM2-206ENST00000409141 A0A1W2PPK0 400 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 A0A1W2PRD5 423 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 A0A1W2PRF3 423 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 A0A1W2PRM7 423 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 SIRPB1O00241 398 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 GABRPO00591 440 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 EEF1B2P24534 225 aaKnown RBP14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 BDKRB2P30411 391 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 VHLP40337 213 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 BDH1Q02338 343 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 SCN1BQ07699 218 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 KLRD1Q13241 179 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 GRK1Q15835 563 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 DDI2Q5TDH0 399 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 NCR3LG1Q68D85 454 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 PIP4P2Q8N4L2 257 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 PXT1Q8NFP0 134 aa14.7□□□□□ -0.06
PDLIM2-206ENST00000409141 SLC25A28Q96A46 364 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms