RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TOX2Q96NM4 488 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 TAAR6Q96RI8 345 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 TPPP3Q9BW30 176 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 NAGKQ9UJ70 344 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 FOXF1Q12946 379 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 ELOBQ15370 118 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 C11orf42Q8N5U0 333 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 MCHR2Q969V1 340 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 HEXA-AS1Q9H8Q6 139 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 ZMIZ1Q9ULJ6 1067 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 RER1O15258 196 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 TSPO2Q5TGU0 170 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 ZNRF4Q8WWF5 429 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 MRPS18BQ9Y676 258 aaKnown RBP15.66■□□□□ 0.1
SMPD4-202ENST00000409031 PLPP3O14495 311 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 BCL2P10415 239 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 RPEL1Q2QD12 228 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 ZDHHC23Q8IYP9 409 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 WFDC6Q9BQY6 131 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 TMEM147Q9BVK8 224 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.66■□□□□ 0.1
SMPD4-202ENST00000409031 F5P12259 2224 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 SLX4Q8IY92 1834 aa15.66■□□□□ 0.1
SMPD4-202ENST00000409031 IGHV3-20A0A0C4DH32 117 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 SYNGR2O43760 224 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 CT62P0C5K7 136 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 PAX5Q02548 391 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 CBLN3Q6UW01 205 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 VN1R17PQ8TDU5 208 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 CLDN23Q96B33 292 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 CDCA3Q99618 268 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-202ENST00000409031 ESRP2Q9H6T0 727 aaKnown RBP15.65■□□□□ 0.1
SMPD4-202ENST00000409031 MPZL1O95297 269 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 CD99P14209 185 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 BTCP35070 178 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 H0Y8X5 98 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 OR3A1P47881 315 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 TMEM255AQ5JRV8 349 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 TUBA4BQ9H853 241 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 ALG1L2C9J202 215 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 M0R1X1 148 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 TOX3O15405 576 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-202ENST00000409031 PGA4P0DJD7 388 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 PGA5P0DJD9 388 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 HOXB3P14651 431 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-202ENST00000409031 HOXA6P31267 233 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 SPCS3P61009 180 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 RNASEKQ6P5S7 137 aaKnown RBP15.65■□□□□ 0.1
SMPD4-202ENST00000409031 LANCL3Q6ZV70 420 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 MYPOPQ86VE0 399 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-202ENST00000409031 GSX1Q9H4S2 264 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-202ENST00000409031 NHSL1Q5SYE7 1610 aa15.65■□□□□ 0.1
SMPD4-202ENST00000409031 LAMB2P55268 1798 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 PITX3O75364 302 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 HKR1P10072 659 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 KIR3DL2P43630 455 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 ZNF124Q15973 351 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 ZNF260Q3ZCT1 412 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 FAM219AQ8IW50 185 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 C20orf196Q8IYI0 205 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 CRYBA2P53672 197 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 PSG6Q00889 435 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 A0A0G2JK05 382 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 LOC102723971A0A1B0GUV8 181 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 G3V3Y1 287 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 C1QL1O75973 258 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 ACTL6AO96019 429 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 TRGC1P0CF51 173 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 RNF224P0DH78 156 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 MRPL30Q8TCC3 161 aaKnown RBP15.64■□□□□ 0.09
SMPD4-202ENST00000409031 FAM122AQ96E09 287 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 LRRC3BQ96PB8 259 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 WDR13Q9H1Z4 485 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 PISDQ9UG56 409 aa15.64■□□□□ 0.09
SMPD4-202ENST00000409031 ERRFI1Q9UJM3 462 aaPredicted RBP15.64■□□□□ 0.09
SMPD4-202ENST00000409031 C11orf94C9JXX5 98 aa15.63■□□□□ 0.09
SMPD4-202ENST00000409031 S100A7P31151 101 aa15.63■□□□□ 0.09
SMPD4-202ENST00000409031 SUB1P53999 127 aaKnown RBP eCLIP15.63■□□□□ 0.099e-7■■■□□ 17.7
SMPD4-202ENST00000409031 GPR12P47775 334 aa15.63■□□□□ 0.09
SMPD4-202ENST00000409031 METAP1P53582 386 aa15.63■□□□□ 0.09
SMPD4-202ENST00000409031 ASB16Q96NS5 453 aa15.63■□□□□ 0.09
SMPD4-202ENST00000409031 SLC2A8Q9NY64 477 aa15.63■□□□□ 0.09
SMPD4-202ENST00000409031 TRBV5-7A0A0A0MS05 114 aa15.63■□□□□ 0.09
SMPD4-202ENST00000409031 HOXA5P20719 270 aa15.63■□□□□ 0.09
SMPD4-202ENST00000409031 SIRPB1O00241 398 aa15.63■□□□□ 0.09
SMPD4-202ENST00000409031 DANCRP0C864 163 aa15.63■□□□□ 0.09
SMPD4-202ENST00000409031 TNFSF4P23510 183 aa15.63■□□□□ 0.09
SMPD4-202ENST00000409031 CD82P27701 267 aa15.63■□□□□ 0.09
SMPD4-202ENST00000409031 FCER1GP30273 86 aa15.63■□□□□ 0.09
SMPD4-202ENST00000409031 GNG4P50150 75 aa15.63■□□□□ 0.09
SMPD4-202ENST00000409031 OR2W5A6NFC9 320 aa15.62■□□□□ 0.09
SMPD4-202ENST00000409031 SOX15O60248 233 aa15.62■□□□□ 0.09
SMPD4-202ENST00000409031 MDKP21741 143 aaPredicted RBP15.62■□□□□ 0.09
SMPD4-202ENST00000409031 EDDM3BP56851 147 aa15.62■□□□□ 0.09
SMPD4-202ENST00000409031 EFNB1P98172 346 aa15.62■□□□□ 0.09
SMPD4-202ENST00000409031 MLF2Q15773 248 aaPredicted RBP15.62■□□□□ 0.09
SMPD4-202ENST00000409031 PRR27Q6MZM9 219 aa15.62■□□□□ 0.09
SMPD4-202ENST00000409031 C16orf82Q7Z2V1 217 aa15.62■□□□□ 0.09
SMPD4-202ENST00000409031 TBC1D26Q86UD7 250 aa15.62■□□□□ 0.09
SMPD4-202ENST00000409031 COX14Q96I36 57 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms