RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 SNCAP37840 140 aa13.13□□□□□ -0.31
ATG4B-206ENST00000405546 NOVA1P51513 510 aaKnown RBP13.13□□□□□ -0.31
ATG4B-206ENST00000405546 TAF9Q16594 264 aa13.13□□□□□ -0.31
ATG4B-206ENST00000405546 PHYHD1Q5SRE7 291 aa13.13□□□□□ -0.31
ATG4B-206ENST00000405546 OPN5Q6U736 354 aa13.13□□□□□ -0.31
ATG4B-206ENST00000405546 HOGA1Q86XE5 327 aa13.13□□□□□ -0.31
ATG4B-206ENST00000405546 MAFAQ8NHW3 353 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-206ENST00000405546 LOC390937A0A1W2PQ73 354 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 ZNF705GA8MUZ8 300 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-206ENST00000405546 M0R135 149 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 HLA-GP17693 338 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 HOXA5P20719 270 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 STARD6P59095 220 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 FXYD4P59646 89 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 SSTP61278 116 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 NHLH2Q02577 135 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 SLC25A47Q6Q0C1 308 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 SUMF2Q8NBJ7 301 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 SUMF1Q8NBK3 374 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 OR13G1Q8NGZ3 307 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 ZNF799Q96GE5 643 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 HDHD3Q9BSH5 251 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-206ENST00000405546 CHST5Q9GZS9 411 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 HDGFL3Q9Y3E1 203 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 B3GALT1Q9Y5Z6 326 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 EML6Q6ZMW3 1958 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 SSR4P51571 173 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 ZFP62Q8NB50 900 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-206ENST00000405546 DTWD2Q8NBA8 298 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 PTX4Q96A99 478 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 AQP10Q96PS8 301 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 ALKBH3Q96Q83 286 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-206ENST00000405546 RTBDNQ9BSG5 229 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-206ENST00000405546 GPR132Q9UNW8 380 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 IGKV1-9A0A0C4DH69 117 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 TMEM14DPA8MWL7 114 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 SCGNO76038 276 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 RBP2P50120 134 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 SRYQ05066 204 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 OR2T2Q6IF00 324 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 PEG10Q86TG7 708 aaKnown RBP13.12□□□□□ -0.31
ATG4B-206ENST00000405546 OR1J1Q8NGS3 322 aa13.12□□□□□ -0.31
ATG4B-206ENST00000405546 MYOZ1Q9NP98 299 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-206ENST00000405546 AQP7P3A6NL99 342 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 ZNF850A8MQ14 1090 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 NUDT19A8MXV4 375 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 K7ESF4 209 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 DHHO43323 396 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 DDTP30046 118 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 RBMXP38159 391 aaKnown RBP13.11□□□□□ -0.31
ATG4B-206ENST00000405546 CDX1P47902 265 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-206ENST00000405546 RRADP55042 308 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 GRB2P62993 217 aaKnown RBP13.11□□□□□ -0.31
ATG4B-206ENST00000405546 SAP25Q8TEE9 199 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 Q8WTZ3 238 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 WFDC1Q9HC57 220 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 CHCHD2Q9Y6H1 151 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-206ENST00000405546 SHANK1Q9Y566 2161 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 DNAJC13O75165 2243 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 TRBV6-7A0A0A0MS04 114 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 A0A1W2PNV4 684 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 TERTO14746 1132 aaKnown RBP13.11□□□□□ -0.31
ATG4B-206ENST00000405546 CST4P01036 141 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 PDGFBP01127 241 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-206ENST00000405546 LSM6P62312 80 aaKnown RBP13.11□□□□□ -0.31
ATG4B-206ENST00000405546 AGBL5Q8NDL9 886 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 NTNG2Q96CW9 530 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 MOB1AQ9H8S9 216 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 PARP11Q9NR21 331 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 HSF4Q9ULV5 492 aa13.11□□□□□ -0.31
ATG4B-206ENST00000405546 C14orf166Q9Y224 244 aaKnown RBP13.11□□□□□ -0.31
ATG4B-206ENST00000405546 GEMIN2O14893 280 aaKnown RBP13.1□□□□□ -0.31
ATG4B-206ENST00000405546 PPP1R2P9O14990 202 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 TOX3O15405 576 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-206ENST00000405546 SCAF4O95104 1147 aaKnown RBP13.1□□□□□ -0.31
ATG4B-206ENST00000405546 B4GALT1P15291 398 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 ERVFRD-1P60508 538 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 UBE2KP61086 200 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 NKX6-1P78426 367 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-206ENST00000405546 UBE2V2Q15819 145 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 PNLIPRP3Q17RR3 467 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 ZNF468Q5VIY5 522 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-206ENST00000405546 ZNF385CQ66K41 422 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-206ENST00000405546 Q7L0L9 218 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 RP1L1Q8IWN7 2480 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-206ENST00000405546 POC1AQ8NBT0 407 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 NAT6Q93015 286 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 SNX22Q96L94 193 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 C19orf12Q9NSK7 152 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 CYTIPO60759 359 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 HIST1H2BKO60814 126 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 HIST1H2BJP06899 126 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 ZNF17P17021 662 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 HIST1H2BOP23527 126 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 HIST1H2BBP33778 126 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 PTGER4P35408 488 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 HIST1H2BDP58876 126 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 HIST1H2BCP62807 126 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 HNF4GQ14541 408 aa13.1□□□□□ -0.31
ATG4B-206ENST00000405546 HIST2H2BEQ16778 126 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms