RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 SLC25A28Q96A46 364 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 PLGRKTQ9HBL7 147 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 GHRLQ9UBU3 117 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 SIGLEC5O15389 551 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 CSTBP04080 98 aaKnown RBP24.42■■□□□ 1.5
USP42-202ENST00000404008 SERPINA2P20848 420 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 GZMKP49863 264 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 SNU13P55769 128 aaKnown RBP24.42■■□□□ 1.5
USP42-202ENST00000404008 IL13RA1P78552 427 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 ESCO2Q56NI9 601 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 OR51T1Q8NGJ9 327 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 SEBOXQ9HB31 216 aaPredicted RBP24.42■■□□□ 1.5
USP42-202ENST00000404008 PCDHB16Q9NRJ7 776 aa24.42■■□□□ 1.5
USP42-202ENST00000404008 DOCK11Q5JSL3 2073 aa24.41■■□□□ 1.5
USP42-202ENST00000404008 FCN3O75636 299 aa24.41■■□□□ 1.5
USP42-202ENST00000404008 UBBP0CG47 229 aa24.41■■□□□ 1.5
USP42-202ENST00000404008 CFPP27918 469 aa24.41■■□□□ 1.5
USP42-202ENST00000404008 DUSP1P28562 367 aa24.41■■□□□ 1.5
USP42-202ENST00000404008 TGFBR1P36897 503 aa24.41■■□□□ 1.5
USP42-202ENST00000404008 GPR107Q5VW38 600 aa24.41■■□□□ 1.5
USP42-202ENST00000404008 MSI2Q96DH6 328 aaKnown RBP24.41■■□□□ 1.5
USP42-202ENST00000404008 MED30Q96HR3 178 aa24.41■■□□□ 1.5
USP42-202ENST00000404008 SSBP3Q9BWW4 388 aaPredicted RBP24.41■■□□□ 1.5
USP42-202ENST00000404008 NAA50Q9GZZ1 169 aaKnown RBP24.41■■□□□ 1.5
USP42-202ENST00000404008 CLN8Q9UBY8 286 aa24.41■■□□□ 1.5
USP42-202ENST00000404008 METRNQ9UJH8 293 aa24.41■■□□□ 1.5
USP42-202ENST00000404008 MAB21L2Q9Y586 359 aa24.41■■□□□ 1.5
USP42-202ENST00000404008 A0A0G2JK05 382 aa24.4■■□□□ 1.5
USP42-202ENST00000404008 A0A1W2PP11 408 aa24.4■■□□□ 1.5
USP42-202ENST00000404008 SMIM30A4D0T7 59 aa24.4■■□□□ 1.5
USP42-202ENST00000404008 A8MXK9 166 aa24.4■■□□□ 1.5
USP42-202ENST00000404008 GABARAPO95166 117 aa24.4■■□□□ 1.5
USP42-202ENST00000404008 HAND1O96004 215 aa24.4■■□□□ 1.5
USP42-202ENST00000404008 SELLP14151 372 aa24.4■■□□□ 1.5
USP42-202ENST00000404008 NPY4RP50391 375 aa24.4■■□□□ 1.5
USP42-202ENST00000404008 GNB2P62879 340 aa24.4■■□□□ 1.5
USP42-202ENST00000404008 RAB11BQ15907 218 aa24.4■■□□□ 1.5
USP42-202ENST00000404008 OSR2Q8N2R0 312 aa24.4■■□□□ 1.5
USP42-202ENST00000404008 ZNF561Q8N587 486 aa24.4■■□□□ 1.5
USP42-202ENST00000404008 LINC01356Q8N9X3 169 aa24.4■■□□□ 1.5
USP42-202ENST00000404008 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP24.39■■□□□ 1.49
USP42-202ENST00000404008 IFITM5A6NNB3 132 aa24.39■■□□□ 1.49
USP42-202ENST00000404008 KIAA1324LA8MWY0 1029 aaPredicted RBP24.39■■□□□ 1.49
USP42-202ENST00000404008 B4DSR2 109 aa24.39■■□□□ 1.49
USP42-202ENST00000404008 DVL1O14640 695 aa24.39■■□□□ 1.49
USP42-202ENST00000404008 GTF2F2P13984 249 aa24.39■■□□□ 1.49
USP42-202ENST00000404008 ZFP36P26651 326 aaKnown RBP24.39■■□□□ 1.49
USP42-202ENST00000404008 KRTAP1-1Q07627 177 aa24.39■■□□□ 1.49
USP42-202ENST00000404008 IKZF1Q13422 519 aa24.39■■□□□ 1.49
USP42-202ENST00000404008 PIGYQ3MUY2 71 aa24.39■■□□□ 1.49
USP42-202ENST00000404008 NHLRC3Q5JS37 347 aa24.39■■□□□ 1.49
USP42-202ENST00000404008 HES5Q5TA89 166 aa24.39■■□□□ 1.49
USP42-202ENST00000404008 WDR25Q64LD2 544 aaPredicted RBP24.39■■□□□ 1.49
USP42-202ENST00000404008 ZNRF1Q8ND25 227 aa24.39■■□□□ 1.49
USP42-202ENST00000404008 STEAP1Q9UHE8 339 aa24.39■■□□□ 1.49
USP42-202ENST00000404008 GLS2Q9UI32 602 aa24.39■■□□□ 1.49
USP42-202ENST00000404008 MED13LQ71F56 2210 aa24.38■■□□□ 1.49
USP42-202ENST00000404008 PHF1O43189 567 aaPredicted RBP24.38■■□□□ 1.49
USP42-202ENST00000404008 BPNT1O95861 308 aa24.38■■□□□ 1.49
USP42-202ENST00000404008 CHRM2P08172 466 aa24.38■■□□□ 1.49
USP42-202ENST00000404008 COL10A1Q03692 680 aa24.38■■□□□ 1.49
USP42-202ENST00000404008 MXD1Q05195 221 aa24.38■■□□□ 1.49
USP42-202ENST00000404008 P2RY14Q15391 338 aa24.38■■□□□ 1.49
USP42-202ENST00000404008 CTF1Q16619 201 aa24.38■■□□□ 1.49
USP42-202ENST00000404008 CYB5R2Q6BCY4 276 aa24.38■■□□□ 1.49
USP42-202ENST00000404008 TMEM104Q8NE00 496 aa24.38■■□□□ 1.49
USP42-202ENST00000404008 MRPS24Q96EL2 167 aaKnown RBP24.38■■□□□ 1.49
USP42-202ENST00000404008 LPAR2Q9HBW0 351 aa24.38■■□□□ 1.49
USP42-202ENST00000404008 ST3GAL6Q9Y274 331 aa24.38■■□□□ 1.49
USP42-202ENST00000404008 NOTOA8MTQ0 251 aa24.37■■□□□ 1.49
USP42-202ENST00000404008 AIPO00170 330 aa24.37■■□□□ 1.49
USP42-202ENST00000404008 SH2D1BO14796 132 aa24.37■■□□□ 1.49
USP42-202ENST00000404008 NDUFB3O43676 98 aa24.37■■□□□ 1.49
USP42-202ENST00000404008 FOXH1O75593 365 aa24.37■■□□□ 1.49
USP42-202ENST00000404008 MSMBP08118 114 aa24.37■■□□□ 1.49
USP42-202ENST00000404008 CLEC2LP0C7M8 214 aa24.37■■□□□ 1.49
USP42-202ENST00000404008 RBM11P57052 281 aaKnown RBP24.37■■□□□ 1.49
USP42-202ENST00000404008 NCS1P62166 190 aa24.37■■□□□ 1.49
USP42-202ENST00000404008 LCN2P80188 198 aa24.37■■□□□ 1.49
USP42-202ENST00000404008 IL13RA2Q14627 380 aa24.37■■□□□ 1.49
USP42-202ENST00000404008 FGFRL1Q8N441 504 aa24.37■■□□□ 1.49
USP42-202ENST00000404008 CST11Q9H112 138 aa24.37■■□□□ 1.49
USP42-202ENST00000404008 CRTAPO75718 401 aaPredicted RBP24.36■■□□□ 1.49
USP42-202ENST00000404008 VSIG8P0DPA2 414 aa24.36■■□□□ 1.49
USP42-202ENST00000404008 ARSBP15848 533 aa24.36■■□□□ 1.49
USP42-202ENST00000404008 CAPZA1P52907 286 aa24.36■■□□□ 1.49
USP42-202ENST00000404008 CAV3P56539 151 aa24.36■■□□□ 1.49
USP42-202ENST00000404008 CLDN12P56749 244 aa24.36■■□□□ 1.49
USP42-202ENST00000404008 VBP1P61758 197 aa24.36■■□□□ 1.49
USP42-202ENST00000404008 QRFPP83859 136 aa24.36■■□□□ 1.49
USP42-202ENST00000404008 LRRC10Q5BKY1 277 aa24.36■■□□□ 1.49
USP42-202ENST00000404008 Q6P435 159 aa24.36■■□□□ 1.49
USP42-202ENST00000404008 SMR3AQ99954 134 aa24.36■■□□□ 1.49
USP42-202ENST00000404008 KCNK15Q9H427 330 aa24.36■■□□□ 1.49
USP42-202ENST00000404008 BANF2Q9H503 90 aa24.36■■□□□ 1.49
USP42-202ENST00000404008 SLC25A10Q9UBX3 287 aaPredicted RBP24.36■■□□□ 1.49
USP42-202ENST00000404008 POLR3KQ9Y2Y1 108 aaPredicted RBP24.36■■□□□ 1.49
USP42-202ENST00000404008 F8P00451 2351 aa24.36■■□□□ 1.49
USP42-202ENST00000404008 ZNF737O75373 536 aa24.35■■□□□ 1.49
USP42-202ENST00000404008 OR2H2O95918 312 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms